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Quick primer to using the CSD Python API — CSD Python API 3.1.0…
https://downloads.ccdc.cam.ac.uk/documentation/API/descriptive_docs/primer.html28 Mar 2024: 3.82 | 949 | aromatic-aliphatic amide [2, 6, 1, 8, 18, 7, 20, 14] | any OH [19, 13] 3.00 | 112 | aromatic-aliphatic amide [2, 6, 1, 8, 18, 7, 20, ... amide N-H [8, 1, 7, 20, 18, 14] 2.41 | 1810 | aromatic-aliphatic amide [2, 6, 1, 8, 18, 7, 20, 14] | any -
Opportunities to invest in early stage companies – Cambridge…
https://www.enterprise.cam.ac.uk/for-external-organisations/opportunities-to-invest/28 Mar 2024: Over 20 years of seed investing at the University of Cambridge has seen a host of successes including XO1, BlueGnome, Cambridge CMOS Sensors, Lumora, Quethera and VocalIQ. -
1 2023-24 Faculty of Music 11 West Road CB3 ...
https://www.mus.cam.ac.uk/files/undergraduate_handbook_2023-24_v6.pdf28 Mar 2024: and 20 students; more interactive than lectures, they typically involve student participation through. ... 20. Plagiarism. Candidates must read and consider fully the University policy on plagiarism. -
Working with cavities — CSD Python API 3.1.0 documentation
https://downloads.ccdc.cam.ac.uk/documentation/API/descriptive_docs/cavities.html28 Mar 2024: print(len(fxa_cavities[0].features)) 50 >>> print(fxa_cavities[0].features) (Feature(acceptor at Coordinates(x=30.506, y=20.947, z=20.879)),. It is possible to find out ... f = fxa_cavities[0].features[0] >>> print(f.type) acceptor >>> -
Pharmacophore searching — CSD Python API 3.1.0 documentation
https://downloads.ccdc.cam.ac.uk/documentation/API/descriptive_docs/pharmacophore.html28 Mar 2024: settings = Pharmacophore.Search.Settings() >>> settings.max_hit_structures = 20 >>> settings.max_hits_per_structure = 1 >>> settings.max_hit_rmsd = 1.0 >>> searcher = Pharmacophore.Search(settings). ... database=feature_db) >>> print(len(hits)) 20 >>> -
Docking API — CSD Python API 3.1.0 documentation
https://downloads.ccdc.cam.ac.uk/documentation/API/modules/docking_api.html28 Mar 2024: rotamer = Docker.Settings.Rotamer(3) rotamer.energy = 10 rotamer.chi1 = (-60,) rotamer.chi2 = (-75, 10) rotamer.chi3 = (-90, 10, 20) assert(rotamer.chi1.angle, -60) assert(rotamer.chi2.min_delta, 10) ... assert(rotamer.chi3.max_delta, 20). -
Working with crystals — CSD Python API 3.1.0 documentation
https://downloads.ccdc.cam.ac.uk/documentation/API/descriptive_docs/crystal.html28 Mar 2024: 20, inclusion='AnyAtomIncluded') >>> print(len(sliced.components)) 84 >>> sliced = crystal.slicing(MolecularDescriptors.atom_plane(crystal.molecule.heavy_atoms)) >>> print(len(sliced.components)) 20. -
Crystal API — CSD Python API 3.1.0 documentation
https://downloads.ccdc.cam.ac.uk/documentation/API/modules/crystal_api.html28 Mar 2024: slicing(plane, thickness=10.0, width=20.0, displacement=0.0, inclusion='CentroidIncluded')The molecules of the crystal subtended by slicing along a plane. -
Text-numeric searching — CSD Python API 3.1.0 documentation
https://downloads.ccdc.cam.ac.uk/documentation/API/descriptive_docs/text_numeric_searching.html28 Mar 2024: query.clear() >>> query.add_compound_name('acetylcholine') >>> print(len(query.search())) 20. When using the ‘exact’ mode we get two fewer hits. >>> -
Installation notes — CSD Python API 3.1.0 documentation
https://downloads.ccdc.cam.ac.uk/documentation/API/installation_notes.html28 Mar 2024: CentOS Stream 8. Ubuntu LTS 20 and 22. We do not support Wayland as a display server protocol (see known issues).
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