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The Evolution and Structural Anatomy of the Small Molecule Metabolic…
https://supfam.mrc-lmb.cam.ac.uk/bioinformatics/people/julian_gough/publications/sat_jmb_ecoli_2001.pdf19 Aug 2001: 1 74 10 12 61 11 33 24 12 24 17 13 15 4 14 16 9 19 27 5 20 18 3 21 19 3 53 1. ... biosynthesis 0 0.4 5 3Aerobic respiration, electron donors. reaction list 0 0.41 24 14Anaerobic respiration, electron donors. -
Domain Combinations in Archaeal, Eubacterial and Eukaryotic Proteomes
https://supfam.mrc-lmb.cam.ac.uk/bioinformatics/people/julian_gough/publications/apic_jmb_domains_2001.pdf25 Jun 2001: co-workers23 usingthe iterative SAM-T99 method.24 The genome sequenceswere scanned against this Hidden Markov model library,nding single or multiple matches with signicantscores. -
Assignment of Homology to Genome Sequences using a Library of Hidden…
https://supfam.mrc-lmb.cam.ac.uk/bioinformatics/people/julian_gough/publications/gough_jmb_supfam_2001.pdf26 Oct 2001: PSI-BLAST23 has been used byseveral groups yielding coverages of 37 % (Huynenet al.24), 39 % (Wolf et al.25), and 41 % (Teichmannet al.26).
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