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  1. Results that match 1 of 2 words

  2. Ubiquitin chain conformation regulates recognition and activity of…

    www-jackson.ch.cam.ac.uk/publications/2012/2012_Nature_UBQ_chains.pdf
    5 Dec 2012: 20 nM USP21i86. 24. 0 0.2 0.4 0.6 0.8 1.0FRET efficiency. ... 100 nM USP21i86. 24. 0 0.2 0.4 0.6 0.8 1.0FRET efficiency.
  3. doi:10.1016/j.str.2008.04.004

    www-jackson.ch.cam.ac.uk/publications/2008/2008_Structure_Jackson_commentary.pdf
    1 Aug 2008: 2008). Biol. Cell, in press. Pub-lished online January 24, 2008. 10.1042/BC20070149.
  4. doi:10.1016/S0959-440X(03)00105-2

    www-jackson.ch.cam.ac.uk/publications/2003/2003_COSB_main.pdf
    16 Sep 2003: Y Y. 24 25 26. Q K. 27. A L. 28 29 30. ... A G. 24 25 26. G A. 27. D V. 28 29 30.
  5. doi:10.1016/j.febslet.2004.04.089

    www-jackson.ch.cam.ac.uk/publications/2004/2004_FEBS_Lett_UBQ.pdf
    23 Aug 2004: plot are linear [24]. In comparison, deviation from linearity. blished by Elsevier B.V. ... 0.235. 0.24. 0 0.5 1 1.5 2. Flu. ores. cenc. e.
  6. No Job Name

    www-jackson.ch.cam.ac.uk/publications/2003/2003_Biochem.pdf
    11 Sep 2003: Methods and Applications,ActaCrystallogr. D49, 24-36. 6. Buckle, A. M., Henrick, K., and Fersht, A. ... 20. Kraulis, P. (1991)J. Appl. Crystallogr. 24, 946-950.21. Laitinen, P. J., Brown, K.
  7. doi:10.1016/j.sbi.2005.07.003

    www-jackson.ch.cam.ac.uk/publications/2005/2005_Main_repeatProtein_COSB.pdf
    26 Aug 2005: 4ANK TALR ANK 4 1.8 12.3 – – [27]. E2_5 ANK 4 3.3 11.4 79 – [24,25]. ... be easily lengthened or shortened by the addition orremoval of individual repeat motifs [12,15,16,22,23,24,25].
  8. Marqusee / Jackson (letter 2)

    www-jackson.ch.cam.ac.uk/publications/1999/1999_NSB_Main_Jackson_TFE.pdf
    16 Sep 2003: email: sej13@cam.ac.uk. Received 6 January, 1999; accepted 24 May, 1999. 1. ... Prot. Chem. 24, 1–95 (1970).6. Chiti, F. et al. J. Mol.
  9. No Job Name

    www-jackson.ch.cam.ac.uk/publications/2002/2002_JACS.pdf
    15 Sep 2003: L.; Rose, G. D.Trends Biochem. Sci. 1999, 24, 77-83.(60) Baldwin, R. ... L.; Rose, G. D.Trends Biochem. Sci. 1999, 24, 26-33.(61) Fersht, A.
  10. EMBO reports VOL 4 | NO 2 | 2003 ...

    www-jackson.ch.cam.ac.uk/publications/2003/2003_Arolla_EMBO.J.pdf
    16 Sep 2003: Received 19 November 2002; accepted 19 December 2002. The first international meeting on the Hsp90 (heat-shock protein 90)chaperone machine was held in Arolla, Switzerland, from 24 to 28 August
  11. 200912161 8189..8194

    www-jackson.ch.cam.ac.uk/publications/2010/2010_PNAS_Mallam_Rogers_Jackson.pdf
    10 May 2010: ture, or that knotting may even occur in the denatured ensemble(24, 25). ... relative ease with which they can form their nativestates during in vitro folding experiments (24, 26, 27).
  12. Context-Dependent Nature of Destabilizing Mutations on the Stability…

    www-jackson.ch.cam.ac.uk/publications/1998/1998_Biochem_Main.pdf
    17 Sep 2003: This increasedto 0.81 (n ) 24) on inclusion of mutations of partially buried hydrophobic residues. ... 23. Shortle, D., and Meeker, A. K. (1989)Biochemistry 28, 936-944. 24.
  13. Stimulation of the Weak ATPase Activity of Human Hsp90 by a Client…

    www-jackson.ch.cam.ac.uk/publications/2002/2002_jmb.pdf
    15 Sep 2003: The IC50 is approximately 10 mM (data notshown) similar to that measured for yeast Hsp90.24. ... J. Biol. Chem. 274, 17525-17533. 24. Panaretou, B., Prodromou, C., Roe, S.
  14. Exploring knotting mechanisms in protein foldingAnna L. Mallam,…

    www-jackson.ch.cam.ac.uk/publications/2008/2008_PNAS_YibK_mutants.pdf
    8 Dec 2008: J Mol Biol346:1409 –1421. 24. Tanford C (1968) Protein denaturation. Part A. ... Theoretical models for the mechanismof denaturation. Adv Protein Chem 24:1–95. 26.
  15. doi:10.1016/j.jmb.2007.06.065

    www-jackson.ch.cam.ac.uk/publications/2007/2007_J_mol_biol_Hsp90_inhibition.pdf
    8 Feb 2008: with a Kd of 29(3) nM, following incubationfor 24 h (Figure 2(d)). ... Kd (nM)4 h. Kd (nM)8 h. Kd (nM)24 h. kon(μM1 s1) koff.
  16. MR-nsmb1204.indd

    www-jackson.ch.cam.ac.uk/publications/2004/2004_NSMB_Hsp90_report.pdf
    6 Jan 2005: Mol. Biol. Cell 12, 3307–3316. (2001).24. Hossain, M.M. & Nakamoto, H.
  17. Local and long-range stability in tandemly arrayedtetratricopeptide…

    www-jackson.ch.cam.ac.uk/publications/2005/2005_PNAS_Main_tetratricopeptide.pdf
    17 Jul 2005: first 24 h, then the number of scans wasdoubled, and data were collected over the next 5– 40 days. ... 1 T kin† T eq.‡. CTPR2 19,860 6,692 50 2.24 0.19 0.35 0.21 2.06 0.18 0.5 0.4CTPR3 35,032 7,601
  18. doi:10.1098/rsif.2004.0025

    www-jackson.ch.cam.ac.uk/publications/2005/2005_Interface_Marianayagam_ubiquitin.pdf
    17 Jul 2005: J. Mol. Biol. 307, 17–24. Ceruso, M. A., Amadei, A. & Di Nola, A.
  19. No Job Name

    www-jackson.ch.cam.ac.uk/publications/2004/2004_Biochemistry_UBQ_core.pdf
    23 Aug 2004: Wild-type and mutant proteins wereexpressed and purified as described elsewhere (24-25). ... Struct. Biol. 8, 331-333. 24. Finucane, M. D., Tuna, M., Lees, J.
  20. doi:10.1016/j.bpc.2007.03.011

    www-jackson.ch.cam.ac.uk/publications/2007/2007_biophys_chem_UBQ.pdf
    8 Feb 2008: caused by aggregation of the native state, WT⁎ at 2 μM, pH 7.4and 37 C was equilibrated for 24 h in 300 g/L glucose. ... Side-. chain transfer is not, however, sufficient to overcome theunfavourable transfer of the backbone, as observed with
  21. doi:10.1098/rsif.2004.0025

    www-jackson.ch.cam.ac.uk/publications/2006/2006_Marianayagam_Interface_UBQ.pdf
    13 Sep 2006: J. Mol. Biol. 307, 17–24. Ceruso, M. A., Amadei, A. & Di Nola, A.
  22. Review 10.1586/14789450.3.5.545 © 2006 Future Drugs Ltd ISSN…

    www-jackson.ch.cam.ac.uk/publications/2006/2006_Exp_review_prot_GFP.pdf
    16 Nov 2006: In contrast to the above mechanisms, one computational DFTstudy suggested that oxidation could precede cyclization [24]. ... 14 hours 24 hours 48 hours 1 week2 weeks3 weeks 4 weeks 5 weeks 6 weeks 7 weeks 8 weeks.
  23. Review R81 How do small single-domain proteins fold?Sophie E ...

    www-jackson.ch.cam.ac.uk/publications/1998/1998_FoldDes.pdf
    11 Sep 2003: given here is twice that of the monomer [23]. mInitial reports suggested that wild-type ubiquitin folded with two-state kinetics [24]. ... 4]), activation domain procarboxypeptidase (ADAh2; [22]), ubiquitin[24,25], histidine-containing phosphocarrier
  24. Journal of Biological Physics 27: 99–117, 2001.© 2001 Kluwer ...

    www-jackson.ch.cam.ac.uk/publications/2001/2001_JBP_Main_et_al.pdf
    16 Sep 2003: In addition, we have shown that TFE does not significantly change the fold-ing pathway of FKBP12 [24]. ... However, although TFE affects the folding andunfolding rate of FKBP12, we have established that this effect is not caused bythe stabilisation of a
  25. No Job Name

    www-jackson.ch.cam.ac.uk/publications/2007/2007_JACS_spin_relaxation.pdf
    11 Feb 2008: W.; Fesinmeyer, R. M.; Andersen, N. H.Nature Struct. Biol. 2002, 9, 425-430.(24) Frisch, M. ... 2 ) 1.26 1020, HFC2 ) 6.24 1018, andXG,HFC) -4.26 1018.
  26. Protein denaturation and protein:drugs interactions from intrinsic…

    www-jackson.ch.cam.ac.uk/publications/2010/2010_Prot_Sci%20_Gaudet.pdf
    26 Jul 2010: AttoOxa11 dyes,24,25 or the use of highly fluorescent. proteins such as yellow fluorescent protein (YFP).26. ... Biotechnol Prog23:1506–1512. 24. Hoffmann A, Kane A, Nettels D, Hertzog DE, Baum-gartel P, Lengefeld J, Reichardt G, Horsley DA, SecklerR,
  27. doi:10.1016/j.jmb.2008.02.013

    www-jackson.ch.cam.ac.uk/publications/2008/2008_JMB_Hsp90_Hop.pdf
    4 Jun 2008: 5b), confirming that Cyp40 insolution exists in this state23,24, suggesting that theobserved structure of the tetragonal crystal form islikely to be a crystallographic artifact. ... Structure, 9, 431–438. 24. Ward, B. K., Allan, R. K., Mok, D., Temple,
  28. b600829c.dvi

    www-jackson.ch.cam.ac.uk/publications/2006/2006_Jackson_Ubiquitin_OBC.pdf
    5 Jun 2006: groups have also studied the effect of mutation of hydrophobiccore groups on the stability.22–24 In these cases, mutation of buriedhydrophobic core residues destabilises the native state of ubiquitinwith the ... Acad. Sci. U. S. A., 2004, 101,
  29. Untangling the folding mechanism of the 52-knottedprotein…

    www-jackson.ch.cam.ac.uk/publications/2009/2009_FEBS_J_UCH-L3.pdf
    3 Apr 2009: disease [22–24]. No stability or folding studies on any of the 52-knot-. ... 24 Setsuie R & Wada K (2007) The functions of UCH-L1.
  30. 201106261 17939..17944

    www-jackson.ch.cam.ac.uk/publications/2011/2011_PNAS_Hsp90_complexes.pdf
    14 Nov 2011: There is a general view that Hop/FKBP52 may competefor available binding sites in the Hsp90 dimer (13, 16, 23, 24).The lack of reliable dissociation constants means that it is ... J Biol Chem 273:18007–18010. 24. Radanyi C, Chambraud B, Baulieu EE (1994
  31. doi:10.1016/j.jmb.2007.04.059

    www-jackson.ch.cam.ac.uk/publications/2007/2007_J_mol_biol_Hsp90+co.pdf
    8 Feb 2008: Structuresfor the isolated, individual domains have beenreported either for human or yeast Hsp90, the ERhomologue Grp94 or the Escherichia coli homologue,HtpG.18–24 In addition, a number of structures oflarger ... Trends Biochem. Sci. 24, 136–141. 4.
  32. Folding and stability of the ligand-bindingdomain of the…

    www-jackson.ch.cam.ac.uk/publications/2002/2002_prot_sci.pdf
    17 Sep 2003: Sci.24: 136–141. Chen, S., Prapapanich, V., Rimerman, R.A., Honore, B., and Smith, D.F.
  33. Evidence of an Intermediate and Parallel Pathways in ProteinUnfolding …

    www-jackson.ch.cam.ac.uk/publications/2008/2008_JACS_SM_GFP.pdf
    1 Aug 2008: AM. CHEM. SOC. 2008, 130, 7898–7907. identified as a continuum-of-substates,19 expansion or collapseof the unfolded state,18,23,24 or just assigned to changes in thedye’s ... Proc. Natl. Acad. Sci. U.S.A. 2006, 103, 11539–11543. (24) Hoffmann, A.;
  34. doi:10.1016/j.jmb.2004.12.055

    www-jackson.ch.cam.ac.uk/publications/2005/2005_Mallam_JMB_KnottedPortein.pdf
    17 Jul 2005: This observation is notexpected for a simple two-state denaturation mech-anism, and indicates that a more complex scheme isnecessary to describe the system fully.24,25 In particu-lar, the ... transition is biphasic33–37 and each transition can
  35. The extremely slow-exchanging core andacid-denatured state of green…

    www-jackson.ch.cam.ac.uk/publications/2008/2008_HFSP_J_GFP.pdf
    19 Dec 2008: Neuberger, A (ed.), pp 23–24,Methuen, London. Mayo, SL, and Baldwin, RL (1993).
  36. doi:10.1016/j.bpc.2004.05.009

    www-jackson.ch.cam.ac.uk/publications/2004/2004_Biophys_Chem_UBQ_Mariana.pdf
    23 Aug 2004: Received 24 March 2004; received in revised form 14 May 2004; accepted 17 May 2004. ... 24] within the GROMACS software package. This. method divides the conformational space of the protein.
  37. Mapping the Interactions Present in the Transition State for…

    www-jackson.ch.cam.ac.uk/publications/1999/1999_JMB1.pdf
    15 Sep 2003: Ala75 2.6 0.11 ÿ5.51 0.12 1.01 0.02 ÿ1.55 0.04 0.34 0.03 0.24 0.01Thr! ... Val76 0.76 0.12 ÿ7.90 0.12 0.94 0.02 ÿ4.24 0.05 0.56 0.2 0.43 0.09Ile!
  38. doi:10.1016/j.str.2006.11.007

    www-jackson.ch.cam.ac.uk/publications/2007/2007_structure_YibK.pdf
    8 Feb 2008: Sextuple 2.6 ( 0.4) 3 102 2.0 ( 0.6) 3 103 0.24 0.07 0.33 0.03 0.6 0.1 1.5 0.3.
  39. Knot formation in newly translated proteins is spontaneous and…

    www-jackson.ch.cam.ac.uk/publications/2012/2012_Nat_Chem_Biol_Knots_GroEL.pdf
    13 Jan 2012: coli 0 4.7 0.1 2.9 0.1 21.8 0.5 –. 1.0 5.5 0.1 24.1 0.6 21 9In vitro expression in a ... pulse proteolysis and western blotting. Protein Sci. 18, 1051–1059 (2009).24. Park, C. &
  40. Protein folding: Defining a “standard” set ofexperimental conditions…

    www-jackson.ch.cam.ac.uk/publications/2005/2005_Maxwell_ProSci_proteinfolding.pdf
    19 Apr 2005: Forexample, 13 of the proteins characterized here were in-cluded in an earlier 24-protein data set that was used toillustrate the relationship between an empirical measure oftopology termed relative contact ... 07 2.04 0.03 13.0 1.9 4.2 0.5
  41. doi:10.1016/j.jmb.2004.09.055

    www-jackson.ch.cam.ac.uk/publications/2004/2004_JMB_McLaughlin_Hsp90.pdf
    6 Jan 2005: Trends Biochem. Sci. 25,24–28. 17. Weikl, T., Muschler, P., Richter, K., Veit, T., Reinstein, J.& Buchner, J. ... J. Biol. Chem. 275, 37181–37186. 24. Adair, G. S. (1925). The hemoglobin system.
  42. Folding Pathway of FKBP12 and Characterisation of the Transition State

    www-jackson.ch.cam.ac.uk/publications/1999/1999_JMB2.pdf
    15 Sep 2003: Article No. jmbi.1999.2941 available online at http://www.idealibrary.com on J. Mol. Biol. (1999) 291, 429444. Folding Pathway of FKBP12 and Characterisation ofthe Transition State. Ewan R. G. Main, Kate F. Fulton and Sophie E. Jackson. Cambridge
  43. doi:10.1016/j.jmb.2007.04.039

    www-jackson.ch.cam.ac.uk/publications/2007/2007_J_mol_biol_GFP_unfolding.pdf
    8 Feb 2008: 19–24 as well as on cooperatively unfoldingregions of proteins.11,14 Although H/D exchangeresults have been reported for GFP, the conditionsused did not allow a quantitative analysis of theresults ... Thesymbols are the same as for (a) except the first
  44. Folding Study of Venus Reveals a Strong Ion Dependence ...

    www-jackson.ch.cam.ac.uk/publications/2010/2010_JBC_Venus_Jackson.pdf
    8 Feb 2010: pH 8.0 37 CYF 2.22 0.06 5.10 0.01 11.3 0.3 5.11 0.02 8.74 0.04Tyr 1.51 0.07 5.24
  45. No Job Name

    www-jackson.ch.cam.ac.uk/publications/2006/2006_Khan_JACS_19FGFP.pdf
    25 Aug 2006: W.Prog. Nucl. Magn. Reson. Spectrosc.1993,. 25, 345-402.(24) Kaptein, R.Bio. Magn. Reson.1982, 4, 145-91.(25) Kaptein, R.; Dijkstra, K.; Nicolay, K.Nature 1978, 274,
  46. Ubiquitin folds through a highly polarizedtransition state Heather…

    www-jackson.ch.cam.ac.uk/publications/2005/2005_PEDS_Ubiquitin_Went_Jackson.pdf
    6 Sep 2005: 0.04 4.46 6 0.07 0.50 6 0.03 1.24 6 0.01 4.22 6 0.07 2.74 6 0.07Ile!Val23 0.45 6 ... 0.04 5.54 6 0.10 0.57 6 0.04 1.24 6 0.02 5.18 6 0.08 2.74 6 0.07Ile!Ala23 2.78 6
  47. doi:10.1016/j.jmb.2006.04.032

    www-jackson.ch.cam.ac.uk/publications/2006/2006_Mallam_JMB_YibK.pdf
    4 Jul 2006: Double-jump unfolding experiments wereused to detect faster unfolding phases corres-ponding to non-native species populated on therefolding pathway.24–26 In these experiments,refolding was allowed for short amounts ... 0.940.10 0.250.02 1.20.1
  48. b908170b 2951..2965

    www-jackson.ch.cam.ac.uk/publications/2009/2009_Hsu_ChemRev.pdf
    28 Sep 2009: pH 6.0 at 25 1C as a function of equilibration time: from right to left 3 h, 12 h, 24 h, 48 h, 5 days, 13 days, 44 days (adapted ... group to demonstrate how information on protein structure. can be obtained using a mechanical triangulation technique.24.
  49. doi:10.1016/j.jmb.2005.11.085

    www-jackson.ch.cam.ac.uk/publications/2006/2006_McLaughlin_JMB_Hsp90.pdf
    21 Apr 2006: p23appears to stabilise the interaction between Hsp90and a client protein in vitro,23,24 correlating with itsability to increase the activation of heterologouslyexpressed estrogen receptor in vivo.25 In contrast,another
  50. doi:10.1016/j.jmb.2004.05.007

    www-jackson.ch.cam.ac.uk/publications/2004/2004_JMB_Hsp90_Zhang_et_al.pdf
    23 Aug 2004: However, it stronglyinhibits the ATPase activity in the presence of aclient-protein.10 Recent work has shown that Sti1/Hop binds to the first 24 amino acid residues ofHsp90 thereby preventing ... N terminus ofHsp90 is within the first 24 amino acid
  51. doi:10.1016/j.jmb.2006.11.014

    www-jackson.ch.cam.ac.uk/publications/2007/2007_J_mol_biol_YbeA+YibK.pdf
    8 Feb 2008: topology that led to the hypothesisthat topology, not sequence, is the major contribut-ing factor in how a protein folds.23,24 If proteinfolding rates and mechanisms are determinedlargely by the

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