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  1. Results that match 1 of 2 words

  2. 1 Supplementary data to accompany paper: Mechanism of endophilin ...

    https://www2.mrc-lmb.cam.ac.uk/groups/hmm/publica/GallopEndophilinEMBO/EndoSupMethods.pdf
    8 Jun 2006: analytical ultracentrifuge with an An60-Ti rotor, with 39, 78 and 156 µM in 150 mM NaCl, 20. ... at 40 and 150 µM protein in 150 mM NaCl, 20 mM HEPES pH 7.4, 2 mM DTT unless.
  3. articles Nucleotide-dependent conformational changes in dynamin:…

    https://www2.mrc-lmb.cam.ac.uk/groups/hmm/publica/Stowell_McMahon1999.pdf
    30 Apr 1999: Undecoratedtubules. t=20 s t=5 min. on tubules on tubules on tubules. ... Results are the average of three experiments s.e.m. 50 10 15 20 25 300.0.
  4. MRC plate poster 18 8 2010 hr

    https://www2.mrc-lmb.cam.ac.uk/groups/JYL/WWWrobots/PDF/PresentationsOther/Poster%20Plates.pdf
    6 Sep 2010:  use robot or manually dispense 20 µl of silicon oil (provided) into each well.
  5. The structure of human thyroglobulin

    https://www2.mrc-lmb.cam.ac.uk/groups/JYL/PDF/TG_Nature2020.pdf
    31 Jan 2020: J. Biol. Chem. 293, 4860–4869 (2018). 20. Yang, S.-X., Pollock, H. ... equili-brated with 20 mM Hepes, 200 mM NaCl at pH 7.5.
  6. Symp72 Chapter 21

    https://www2.mrc-lmb.cam.ac.uk/groups/hmm/publica/BARreview2005.pdf
    5 Jan 2005: dendrites. Tuba [20], anotherBAR protein, has Rho GEF activity and multiple SH3 domains that binddynamin, N-WASP (neural Wiskott–Aldrich syndrome protein) and otheractin-regulating proteins.
  7. tutorial.dvi

    https://www2.mrc-lmb.cam.ac.uk/personal/pemsley/coot/files/newt.pdf
    18 Jun 2018: 20. Figure 5: Coot’s Go To Atom Window (it doesn’t look exactly like this anymore). •
  8. Biol. Chem., Vol. 381, pp. 993 – 999, September/October ...

    https://www2.mrc-lmb.cam.ac.uk/groups/JYL/PDF/BiolChem%20Helical%20Tubes.pdf
    13 Sep 2000: The protein was stored at4 C in 20 mM TRIS, 1 mM EDTA, 1 mM Na-azide. ... P3 yields exclu-sively empty tubes. All reactions were incubated for 20 min at37 C.
  9. CURRICULUM VITAE

    https://www2.mrc-lmb.cam.ac.uk/groups/bienz/wp-content/uploads/sites/23/BienzCV_March2024.pdf
    11 Apr 2024: tumour suppressor with the membrane of polarized mammalian cells. EMBO J 20, 5929-5939. ... EMBO J 20, 4935-4943. 73. Hamada F & Bienz M (2002) A Drosophila APC tumour suppressor homologue functions in.
  10. MD1-98 The LMB Screen

    https://www2.mrc-lmb.cam.ac.uk/screens2/pdf/LMB21.pdf
    15 Jul 2016: 8 % v/v PEG 550 MME1-36 8 % w/v PEG 20,000/ 0.1 M Sodium acetate 5.5 0.2 M Potassium thiocyanate. ... 20 % v/v Glycerol2-47 1.6 M Sodium/potassium phosphate 6.02-48 1 M Sodium citrate 6.2.
  11. PNAS202120006_proof

    https://www2.mrc-lmb.cam.ac.uk/groups/JYL/PDF/pnas%20Lee%202022.pdf
    18 Dec 2022: S2A). ABC-typeATPases bound to ADP.BeF3 often represent the enzyme–substrate complex (20). ... The peak fractionswere concentrated using a Vivaspin 20 100,000-Da centrifugal concentrator andfrozen.
  12. 1 Coot Updates Paul EmsleySept 2017 2 N-linked Carbohydrates● ...

    https://www2.mrc-lmb.cam.ac.uk/personal/pemsley/coot/files/presentations/Coot-CCP4-Ligands-Sept-2017-v2.pdf
    29 Sep 2017: 19. Puzzle 5-2: Annealed. 20. Puzzle 5-2: Comparison. 21. Puzzles 5-2: Coot model is better? ... Slide 19. Slide 20. Slide 21.
  13. Contrasting Membrane Interaction Mechanisms of AP180N-terminal…

    https://www2.mrc-lmb.cam.ac.uk/groups/hmm/publica/Stahelin_cho2003.pdf
    16 Jul 2003: and POPC/POPE/phos-phatidylinositol 3,4,5-trisphosphate (77:20:3) vesicles. ... a Increase in Kd relative to binding POPC/POPE/PtdIns(4,5)P2 (77:20:3) vesicles.b Not measurable.
  14. doi:10.1016/j.jmb.2004.05.031

    https://www2.mrc-lmb.cam.ac.uk/groups/JYL/PDF/zapa%202004.pdf
    16 Aug 2004: Mol. Biol. (2004) 341, 839–852. diverse roles18–20 that include anchoring the ring tothe cell membrane, invagination and constriction,septum formation and peptidoglycan synthesis toyield two separate daughter cells. ... After centrifugation, the
  15. st7a11.qxd

    https://www2.mrc-lmb.cam.ac.uk/groups/JYL/PDF/MukB%20Structure%201999.pdf
    10 Sep 1999: We have usedboth secondary structure [19] and coiled-coil predictionprograms [20] to define a domain (residues 1–227), whichdoes not contain residues with significant coiled-coil prob-ability, but includes all ... S1 S2.
  16. mc4604.qxd

    https://www2.mrc-lmb.cam.ac.uk/groups/JYL/PDF/current%20opinion%20micro%202001.pdf
    12 Nov 2001: FtsZ is highly conserved and is present in mostbacteria and archaea [19,20]. ... FtsA is the keycomponent in the sequential recruitment of othercomponents of the divisome [19,20].
  17. se289900215p

    https://www2.mrc-lmb.cam.ac.uk/groups/hmm/research/strucrev.pdf
    6 Jul 1999: Crystallography; CHC proximal legdomain residues 1210 to 1516 (20). 2.6 CHC proximal leg, clathrin LC. ... 20. J. A. Ybe et al., Nature 399, 371 (1999).21. Single-letter abbreviations for the amino acid resi-.
  18. Features critical for membrane binding revealed by DivIVA crystal…

    https://www2.mrc-lmb.cam.ac.uk/groups/JYL/PDF/emboj201099a.pdf
    20 May 2010: 1 20 73 125 164. N-terminal domain. C-terminal domain. Figure 1 B. ... ω. Cβ. 10 20 30 40 50 60 70–8–40. 48. Δω.
  19. LETTERS Structural basis for selective recognition of ESCRT-IIIby the …

    https://www2.mrc-lmb.cam.ac.uk/groups/rlw/download/publications/17928861.pdf
    8 Dec 2007: Concentration (µM)0 20 40 60 80 100. I–I 0. (arb. itrar. ... interaction. Indeed, CHMP1Bbinds human Vps4A MIT domain with a Kd of 20 mM (ref.
  20. mbar-v2

    https://www2.mrc-lmb.cam.ac.uk/personal/pemsley/coot/files/presentations/mbar-v2.pdf
    31 Aug 2018: Under “Weight Matrix”, set the Refinement Weight to 20. 1.2. Automatic model building will only rarely produce a model which is both complete and correct.
  21. 740 Research Paper Calcium triggers calcineurin-dependent synaptic…

    https://www2.mrc-lmb.cam.ac.uk/groups/hmm/publica/Marks_McMahon1998.pdf
    21 Mar 2003: whereas glutamate release was essentially unaffected (96 9% ofmaximal; n = 3) in the presence of 20 µM cyclosporin A. ... Fol-lowing two washes, the synaptosomes were spun briefly a third timeand resuspended in lysis buffer (20 mM Hepes).
  22. Activation of GCN2 by the ribosomal P-stalk

    https://www2.mrc-lmb.cam.ac.uk/groups/hegde/download/PNAS_2019.pdf
    7 Mar 2019: Upon deletion of the CTD (construct C), GCN2’sbasal activity increased 20-fold (Fig. ... 0.001 0.01 0.1 1 10 1000. 10. 20. 30. 40. Time (min). %
  23. 2623.tif

    https://www2.mrc-lmb.cam.ac.uk/groups/nu/pdf/jcb90.pdf
    23 Jan 2012: n d for a s e c o n d image a t 20,000 A u n - derfocus. ... and the second one at ,20,000 A underfocus, using a nominal magnification of 36,000.
  24. emulator as well as a solid understanding of its ...

    https://www2.mrc-lmb.cam.ac.uk/groups/hmm/publica/Papers/Traub&Wendland2010.pdf
    1 Jun 2010: 1), with more than 20 established binding part-ners. AP-2 therefore acts as an organizational scaffold that associates with several partners synchronously. ... Mol. Biol. Cell 20, 4640–4651 (2009).4. Boettner, D. R. et al.
  25. INVITED REVIEW Mechanosensory molecules and circuits in C. elegans ...

    https://www2.mrc-lmb.cam.ac.uk/groups/wschafer/2015-2.pdf
    10 Dec 2014: neuron, which appears to be unimpor-tant for touch-evoked escape behavior, expresses the neuro-peptide precursor gene flp-20 [43], which has recently been. ... elegans. Learn Mem 20(2):103–108. doi:10.1101/lm.028993.112. 52. Li W, Feng Z, Sternberg PW,
  26. Mechanism of ribosome stalling during translation of a poly(A) tail

    https://www2.mrc-lmb.cam.ac.uk/groups/hegde/download/NSMB_2019.pdf
    25 Nov 2019: A-siteP-site STOP. Testsequence. a. 20 40. Time (min). 600. 20. 40. ... Nat. Rev. Mol. Cell Biol. 20, 406–420 (2019). 5. van Hoof, A. &
  27. x16412u141

    https://www2.mrc-lmb.cam.ac.uk/groups/hmm/publica/MaoAP180-2001.pdf
    17 Mar 2003: vesicle endocytosis. J. Neurosci. 20, 8667–8676. Ye, W., and Lafer, E.M. ... I. Developmental expres-sion and cellular localization of the F1-20 protein and mRNA.
  28. Paul EmsleyMRC Laboratory of Molecular Biology, Cambridge, UKJune…

    https://www2.mrc-lmb.cam.ac.uk/personal/pemsley/coot/files/Ligands-July-2015-v2.pdf
    16 Jul 2015: coot.available-comp-id JE 20. JEA JEB JEC JED JEE JEG JEH JEI JEJ JEK. ... Slide 15. Slide 16. Slide 17. Slide 18. Slide 19. Slide 20.
  29. Structure of the hexagonal surface layer on Caulobacter crescentus…

    https://www2.mrc-lmb.cam.ac.uk/groups/JYL/PDF/s-layer-nmicrobiol201759.pdf
    6 Apr 2017: The central pore is 20 Å wide, and the lattice is70 Å thick. ... J. Bacteriol. 192, 5855–5865 (2010). 20. Smit, J., Engelhardt, H., Volker, S., Smith, S.
  30. Filament structure and subcellular organization of the bacterial…

    https://www2.mrc-lmb.cam.ac.uk/groups/JYL/PDF/Liu_PNAS_crescentin_2024.pdf
    28 Apr 2024: coil (9, 20) (Fig.
  31. Cryo‐EM structure of the full‐length Lon protease from Thermus…

    https://www2.mrc-lmb.cam.ac.uk/groups/JYL/PDF/Lon%20Coscia%202021%20FEBS.pdf
    14 Nov 2021: cycle have remained unclear [3,19,20]. Here, we have determined the complete three-. ... Curr Res Struct. Biol 1, 13–20.17 Jean NL, Rutherford TJ and Lowe J (2020) FtsK in.
  32. bic054a

    https://www2.mrc-lmb.cam.ac.uk/groups/hmm/publica/LundmarkBJ2008.pdf
    11 Aug 2008: Similar results wereobtained for Arf6, but Arf6 bound even more strongly to mem-branes in the absence of GTP, probably due to binding sites onthe protein core ([19,20] and results ... J. Biol. Chem. 280, 21661–21666. 20 Amor, J. C., Horton, J.
  33. Calcium-mediated Evidence from the Changes in Gap Junction Low ...

    https://www2.mrc-lmb.cam.ac.uk/groups/nu/pdf/jcb83.pdf
    1 Nov 2012: We used 20-30 rats (Sprague-Dawley, Madison, WI), of 160 g body wt, for each set of experiments. ... pieces, and homogenized in 20-ml portions in a Potter-Elvehjem glass homogenizer with a loose-fitting teflon pestle.
  34. Bacterial chromosome segregation: structure andDNA binding of the Soj …

    https://www2.mrc-lmb.cam.ac.uk/groups/JYL/PDF/soj_embo2005.pdf
    30 Jan 2005: Soj ATPase is activated by the N-terminal 20 amino. acids of Spo0J. ... MinE: first 35 amino acids (N-terminal domain). FtsA:last 20 amino acids.
  35. mmi_3991.fm

    https://www2.mrc-lmb.cam.ac.uk/groups/JYL/PDF/ftsn2004.pdf
    15 Apr 2004: Amersham) in 20 mMNa-Phosphate, pH 6.0, 1 mM EDTA, 1 mM DTT. ... Residues 5–75 0.62 0.15 Å(All heavy atoms). Residues 5–75 1.20 0.17 Å.
  36. early in DNA damage response and regulateRAP80 localization. Many ...

    https://www2.mrc-lmb.cam.ac.uk/groups/hmm/publica/MartensSytPap07.pdf
    16 Oct 2009: trans-SNARE complexes, which have been suggestedto be ordered ringwise around the future fusionsite (20). ... Anestimate of the energy released on going frombuckle to stalk formation is 20 kBT.
  37. doi:10.1128/mBio.00800-13. 4(6): .mBio. Midcell DNA Translocase FtsK…

    https://www2.mrc-lmb.cam.ac.uk/groups/JYL/PDF/mbio2013bisicchia.pdf
    23 Dec 2013: A single band at 20 kDa is visible, in agreement with the expected size of the protein. ... 3:532–536. 20. Espeli O, Levine C, Hassing H, Marians KJ. 2003.
  38. DOI: 10.1126/science.1135394 , 239 (2007); 317Science et al.Nabil…

    https://www2.mrc-lmb.cam.ac.uk/groups/rlw/download/publications/17626883.pdf
    8 Dec 2007: 0. 20. 40. 60. 80. 100. 120. 140. 0 50 100 150p85ni (nM). ... 65, 4562 (2005).20. S. J. Isakoff et al., Cancer Res. 65, 10992 (2005).21.
  39. 25 Structural studies of phosphoinositide 3-kinase-dependent traffi c …

    https://www2.mrc-lmb.cam.ac.uk/groups/rlw/download/publications/17233579_proof.pdf
    14 Jun 2007: Chem. 279, 36059–36071. 20. Bache, K.G., Slagsvold, T., Cabezas, A., Rosendal, K.R., Raiborg, C. ... and Sundquist, W.I. (2004) Annu. Rev. Cell Dev. Biol. 20, 395–42553.
  40. Pi-PEG Screen 1.5 disclaimer

    https://www2.mrc-lmb.cam.ac.uk/groups/JYL/WWWrobots/LMB%20plates/LMB19b-Pi-PEG_Screen_1.5_disclaimer.pdf
    27 Sep 2022: MME 8.55 % 1-19 PEG 300 25.65 % HEPES 75 mM 7.1 PEG 600 8.55 % 1-20 PEG 350 MME 25.65 % HEPES 75 mM 7.3 PEG ... 15 % 2-19 PEG 600 8.55 % HEPES 75 mM 7.1 PEG 300 42.9 % 2-20 PEG 1000 7.5 % HEPES 75 mM 7.3 PEG 350 MME
  41. Proc. Natl. Acad. Sci. USAVol. 94, pp. 9637–9642, September ...

    https://www2.mrc-lmb.cam.ac.uk/groups/rlw/download/publications/9275175.pdf
    20 Apr 2002: Communicated by Max F. Perutz, Medical Research Council, Cambridge, United Kingdom, June 20, 1997 (received for review April 2, 1997). ... 20. Leslie, A. G. W. (1992) Joint CCP4 and ESF-EACMB Newsletteron Protein Crystallography (Daresbury Lab.,
  42. Coot: Model-building tools for Molecular Graphics

    https://www2.mrc-lmb.cam.ac.uk/personal/pemsley/coot/files/presentations/coot-cshl-2018.pdf
    24 Oct 2018: Slide 19. Slide 20. Slide 21. Slide 22. Slide 23. Slide 24.
  43. tutorial.dvi

    https://www2.mrc-lmb.cam.ac.uk/personal/pemsley/coot/files/tutorial.pdf
    21 Jan 2010: 20. • You can display the contacts too, as you do this:. – ... Python enabled version only: a dialog with geometric outliers and other in-teresting things (if they exist) detected by Refmac shows up 20.
  44. Manipulating Ligands Using Coot with a bit of carbohydrates ...

    https://www2.mrc-lmb.cam.ac.uk/personal/pemsley/coot/files/coot-may-2017-ligands-madrid-mcs2017-csic.pdf
    10 May 2017: 60.005 20.000 1 ADP var_2 PA O3A PB O1B 59.979 20.000 1 ADP var_3 O2A PA "O5'" "C5'" -59.942 20.000 1 ADP ... 20.000 1 ADP var_7 "C5'" "C4'" "C3'" "C2'" -150.000 20.000 3.
  45. 30 Apr 2004 18:9 AR AR214-BB33-09.tex AR214-BB33-09.sgm…

    https://www2.mrc-lmb.cam.ac.uk/groups/JYL/PDF/annrev2004.pdf
    1 May 2004: The best-characterizedsystem in this context is Spo0J fromB. subtilisand 8–10 copies ofcis-actingparSelements situated around 20% of theoriC region (86). ... 20. Cordell SC, L owe J. 2001. Crystal struc-ture of the bacterial cell division regulatorMinD.
  46. 73885 949..955

    https://www2.mrc-lmb.cam.ac.uk/groups/nu/pdf/nature03.pdf
    19 Jun 2003: holes, using a 300-kV field emission microscopeincorporating a top-entry liquid-helium-cooled stage10 (magnification, £36,800; defocusrange, 9,000–16,000 Å; dose, ,20 electrons Å22). ... 3H]diazofluorene. J. Biol. Chem. 273, 8659–8668 (1998). 20.
  47. 53091 361..366

    https://www2.mrc-lmb.cam.ac.uk/groups/hmm/publica/McMahon01020.pdf
    3 Dec 2004: This points to a function ofAP180 in limiting vesicle size (see also refs 13, 20, 21). ... interactions. J. Cell Biol. 155, 193–200 (2001). 20. Zhang, B. et al.
  48. MergedFile

    https://www2.mrc-lmb.cam.ac.uk/groups/nu/pdf/iucrj17.pdf
    24 May 2017: For three-. dimensional classification, an initial 20 Å resolution model. was generated by Fourier–Bessel synthesis from structure-.
  49. doi:10.1016/S0076-6879(05)04052-8

    https://www2.mrc-lmb.cam.ac.uk/groups/hmm/publica/HigginsMcMahonMethods2005.pdf
    26 Jan 2006: Dialyze into 150 mM NaCl, 20 mMHEPES pH 7.4, 0.4 mM DTT for use. ... 1998), dialyzed into HKMbuffer, and centrifuged for 20 min at 100,000g immediately prior to useto remove aggregates.
  50. FtsK in motion reveals its mechanism for double-stranded DNA…

    https://www2.mrc-lmb.cam.ac.uk/groups/JYL/PDF/FtsK_Jean_2020_PNAS.pdf
    8 Jun 2020: For thedsDNA, a 20-bp B-form dsDNA model was generated in Coot (32) and fittedmanually inside the map. ... Proc. Natl. Acad. Sci.U.S.A. 114, E697–E706 (2017). 20. A. H. de la Peña, E.
  51. Changes in Postural Syntax Characterize Sensory Modulation and…

    https://www2.mrc-lmb.cam.ac.uk/groups/wschafer/2015-5.pdf
    14 Aug 2015: 5000 skeletonswere randomly selected from each of 20 randomly selected N2 worms recorded crawling onfood. ... n-gram modelThe n-gram language model analyses were implemented in C and Python using the OpenFST[45] and OpenGRM n-gram [20] libraries.

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