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14 Jan 2011: 30 APRIL 2010. 178101-2. eight bases provide a ‘‘toehold’’ for binding of the antifuelf, which is also 24 bases long and complementary to thewhole of f. ... 60. 0,0 0,8 0,16 8,16 16,8 24,0. Free. Ene. rgy. / kT.

4 Jan 2011: geometry. TheBLmGBD potential makes use of the orientation-dependentmolecular shape parameter and the energy parameter tomodel the interaction between two uniaxial oblate ellipsoids(24), each having a single-site representation. ... J Chem Phys 74:3316

4 Jan 2011: aðq jÞ@q j;g. q j0. 1. 2pn j;g. 24. 35. 2. ... Annu Rev PhysChem 1997, 48:545-600. 24. Miller MA, Wales DJ: Energy landscape of a model protein.J Chem Phys 1999, 111:6610-6616.

13 Jan 2011: Chem. Phys. 122, 084714 2005! Downloaded 24 Mar 2005 to 147.188.105.99. ... J. Chem. Phys. 122, 084714 2005! Downloaded 24 Mar 2005 to 147.188.105.99.

4 Jan 2011: 0892 0.04568 18.0000320936 4 0.0448 0.02298 18.0000240710 12 0.0145 0.00748 18.0000240710 4 0.0426 0.02188 18.0000000700 24 0.0140 0.00718 ... C. A. M. Mooij, D. Frenkel, H. N. W. Lekker-. kerker, Nature 1993, 365, 425.[24] A.

13 Jan 2011: Our landscape and path complexity. measures are quite general, irrespective of the kinds of energy[i.e., potential or free energy (9, 24)] and model. ... Wales DJ, Dewsbury PEJ (2004) J Chem Phys 121:10284.24. Evans DA, Wales DJ (2003) J Chem Phys

13 Jan 2011: Name Length E Sequence. HP-20 20 )9 HPHP2H2PHP2HPH2P2HPHHP-24 24 )9 H2P2ðHP2Þ6H2HP-25 25 )8 P2HP2ðH2P4Þ3H2HP-36 36 )14 P3H2P2H2P5H7P2H2P4H2P2HP2HP-48 48 )23 P2HðP2H2Þ2P5H10P6ðH2P2Þ2HP2H5HP-50 50 )21 H2ðPHÞ3PH4PðHP3Þ3PðHP3Þ2HPH4ðPHÞ4H.

13 Jan 2011: This model isclosely related to the “void model” for structural changes andmelting of clusters.24. ... A.; Wales, D. J.J. Chem. Phys.2004, 121, 6689.(24) Berry, R. S.; Smirnov, B.

14 Jan 2011: Since high temperatures are equivalent to weakbonding interactions, this finding is consistent with the ex-perimental observation that protein-protein interactions in vi-rus capsids are generally weak.24. ... M. Teschke, J. Mol. Biol. 365,513 2007. 24 A.

4 Jan 2011: Address correspondence todw34@cam.ac.uk. Received for review October 4, 2009and accepted December 24, 2009. ... 24. Wales, D. J. Discrete Path Sampling. Mol. Phys. 2002, 100,3285–3306.

13 Jan 2011: Name Sequence EGM DGM. HP-20 HPHPPHHPHPPHPHHPPHPH 9 2HP-20a HPHHPPHPHPPHPHPHPHPH 8 17HP-24 HHPPHPP6HH 9 19HP-25 PPHPPH2P43HH 8 16HP-36 P3H2P2H2P5H7P2H2P4H2P2HP2 14 192HP-48 P2HP2H22P5H10P6H2P22HP2H5 23 285HP-50 H2PH3PH4PHP33PHP32HPH4PH4H ... 24

14 Jan 2011: 24,57. In the model, the repulsion between particles i and j isbased upon an isotropic Lennard-Jones potential. ... C. Rapaport, Phys. Rev. Lett., 2008, 101, 186101.24 A. W. Wilber, J.

13 Jul 2011: performing a complete cycle of a thermodynamic enginesuch as the Carnot- [24] or the Otto-engine [25]. ... KGaA, Weinheim www.zaac.wiley-vch.de 1795. number of thermodynamic processes have been analyzed, e.g.Carnot-cycles [24, 29, 30], Diesel-cycles [31],

13 Jan 2011: 4.046 4.050F-FCC 200 5.000 24.15 1.531 1.602 H-F 270 3.704 767.4 4.579 4.518F-BCC 125 8.000 44.75 ... 24 D. Frenkel and A. J. C. Ladd, J. Chem. Phys.

7 Mar 2011: 99.1 240 43.4 283 26.7 0.017 0.17 24.29.2 253 55.5 308 30.4 0.0011 0.23 27.110.3 256 48.4 ... Biophys.J. 86:2923–2928. 24. Reference deleted in proof. 25. Olichon, A., L.

13 Jul 2011: glasses J. Magn. Magn. Mater. 272–276 1284–5[24] Derrida B 1981 Random-energy model: an exactly solvable model of disordered systems Phys. ... Rev. B 24 2613–26[25] Sibani P and Schriver P 1994 Local phase-space structure and low-temperature

4 Jan 2011: 24) Lal, R.; Lin, H.; Quist, A. Biochimi. Biophys. Acta 2007, 1768, 1966–1975. ... Y. C. Proteins: Struct., Funct., Bioinf. 2008, 72, 1–24. (49) Monette, M.; Lafleur, M.

4 Jan 2011: folding temperature to the glass transition temperature [23,24]. The resulting database contained 212054 minima and 206923. ... protein folding. Proc Natl Acad Sci USA 84: 7524. 24. Goldstein RA, Luthey-Schulten ZA, Wolynes PG (1992) Optimal

4 Jan 2011: S. Berry, J. Phys. B 24, L351 1991. 10 B. Eckhardt and D. ... Many-Particle Lyapunov Vectors 2004 http://arxiv.org/abs/nlin/0404028. 24 H. Abarbanel, R. Brown, and M.

14 Jan 2011: Zukoski, J. Chem. Phys., 2002, 117, 8540.24 X. Song, Phys. Rev.