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  2. CSD Portfolio Release Notes

    https://www.ccdc.cam.ac.uk/media/release-installation-notes-1.pdf
    27 Mar 2024: This will involve the following steps:. Download the online CSD Release installer from https://www.ccdc.cam.ac.uk/support-and-resources/csdsdownloads/.This will require your Customer Number and Activation ... The installer will download the selected
  3. Table of Contents Introduction…

    https://www.ccdc.cam.ac.uk/media/Documentation/75D6F5FC-8B6E-4795-BDCC-67A3300639A6/CSD-CrossMiner-tutorial-4-features-database.pdf
    17 Jan 2023: also available from workshops webpage), it will take less than 5 minutes to. ... complete. The feedback is anonymous. You will be asked to insert the workshop.
  4. Table of Contents Introduction…

    https://www.ccdc.cam.ac.uk/media/Documentation/DC4CF234-A5EC-494B-BC93-936314D78BB7/CSD-CrossMiner-tutorial2-pharmacophore-query.pdf
    17 Jan 2023: and drag using the middle mouse button (MMB). This will change the radius. ... the feature tick-box in the CSD-CrossMiner Show: toolbar (which will turn.
  5. Table of Contents The Purpose of…

    https://www.ccdc.cam.ac.uk/media/Documentation/F660721C-0B58-48E6-A8AE-76DD0803FC3D/GOLD-tutorial-PosePrediction.pdf
    17 Jan 2023: analyse docking results. To get started, you will use the Hermes visualiser to:. • ... Please download the example folder of input files. Is this an easy docking?
  6. Table of Contents Purpose of Docking…

    https://www.ccdc.cam.ac.uk/media/Documentation/EE9787F1-9256-4A91-8264-95371DCD8008/GOLD-tutorial-Flexibility-Constraints.pdf
    17 Jan 2023: Please download the example files for this tutorial. You will balance flexibility and constraints in two separate docking experiments trying to predict the poses of:. • ... You will:. • carefully inspect your protein crystal structure. • use
  7. Table of Contents Docking with Water in the Binding ...

    https://www.ccdc.cam.ac.uk/media/Documentation/4DDADBC4-A645-4E44-AD37-73D09F04C298/GOLD-DockingWater-tutorial.pdf
    17 Jan 2023: Materials For this workshop we will use the files that you can download from here. ... click OK. You will be informed that 98 water molecules have been deleted.
  8. Introduction to the CSD Python API (PYAPI-001) 2020.3 CSD ...

    https://www.ccdc.cam.ac.uk/media/Documentation/6AA69486-FA98-4182-84F9-50A586CC0B04/CSD-Python-API-workshop.pdf
    17 Jan 2023: Materials. For this workshop you will need the file example.cif that you can download here. ... Giving the 'CSD' argument to the. EntryReader will open the installed CSD database.
  9. Table of Contents Introduction…

    https://www.ccdc.cam.ac.uk/media/Documentation/E8327590-2CDF-40AF-8092-28B67E58BE72/Ligand_Based_Virtual_Screening_Tutorial.pdf
    17 Jan 2023: and enrichment metrics will be calculated. Please download the example files here. ... includes up to 200 conformers of my_ligand.mol2. The command above will.

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