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  2. Shiny app for visualisation of three timepoints from the Yang 2019…

    bioinf.stemcells.cam.ac.uk:3838/bulkAnalyseR/Yang2019/
    Show sample labels. Show ellipses around groups. File name for PCA plot download. ... Heatmap values. Expression. Log2 Expression. Z-score. File name for heatmap plot download.
  3. Introduction to R

    https://www.cl.cam.ac.uk/~djw1005/Teach/R/index.html
    In this course you will learn how to use R to summarize data, analyze log files, plot graphs, and explore patterns. ... Download and installation instructions for Linux, MacOSX and Windows.
  4. Human HSC and progenitor cells across anatomic locations

    bioinf.stemcells.cam.ac.uk:3838/laurenti/ExtramedHSPCs/
    pc1. pc2. pc3. pc4. pc5. umap1. umap2. Toggle plot controls. Colour (Continuous data):. ... Plot size:. Small. Medium. Large. Font size:. Small. Medium. Large. PDF / PNG height:.
  5. flybrain.mrc-lmb.cam.ac.uk/dokuwiki/doku.php?do=export_raw&id=si:f…

    flybrain.mrc-lmb.cam.ac.uk/dokuwiki/doku.php?do=export_raw&id=si:frulhns:start
  6. TreeVector - Integrated Phylogenetic Trees Using SVG

    https://supfam.mrc-lmb.cam.ac.uk/TreeVector/selectnames.html
    Plot Tree. Download Topology as Text. TreeVector by Ralph Pethica.
  7. Generate SCOP Domain Assignments using the SUPERFAMILY Models

    https://supfam.mrc-lmb.cam.ac.uk/SUPERFAMILY/howto_use_models.html
    1: Setup models and scripts - explains how to download and setup the SUPERFAMILY models and scripts. ... Download the SUPERFAMILY models and scripts:. wget --http-user USERNAME --http-password PASSWORD -r -np -nd -e robots=off -R 'index.html'
  8. The Trinity Clock

    https://clock.trin.cam.ac.uk/main.php?menu_option=data&date=11/08/2023
    From. to. [Zoom menu. visible. invisible. Plot. Drift. Amplitude. Going. Air temp. ... scatter plot. cloud plot. with. fixed scale. auto scale. 11 Aug 2023 [06:31].
  9. Human HSPCs in BM, non-mobilised PB and mobilised PB

    bioinf.stemcells.cam.ac.uk:3838/laurenti/mobPB_HSPCs/
    Toggle plot controls. Colour (Continuous data):. White-Red. Blue-Yellow-Red. Yellow-Green-Purple. Plot order:. ... Plot order:. Max-1st. Min-1st. Original. Random. PDF / PNG height:. PDF / PNG width:.
  10. si:frulhns:start - Jefferis Lab DokuWiki

    flybrain.mrc-lmb.cam.ac.uk/dokuwiki/doku.php?id=si:frulhns:start
    Start R # install (one time only) install.packages("IgorR") # code to read Igor binary files (Greg) install.packages("STAR") # code for Spike Train Analysis from Christophe Pouzat # download gphys package from ... note that this download includes full

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