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  2. SVN setup - CUC3

    https://wikis.ch.cam.ac.uk/cuc3/wiki/index.php/SVN_setup
    6 Jan 2021: To make subversion easy to use, you need to specify some locations in your. ... Finally, before you download the code, you need to set up the log file template.
  3. Preparing an AMBER topology file for a protein plus ligand system -…

    https://wikis.ch.cam.ac.uk/cuc3/wiki/index.php/Preparing_an_AMBER_topology_file_for_a_protein_plus_ligand_system
    6 Jan 2021: Molfacture, a tool in VMD. You will need the latest version of VMD to do this so either download and compile it yourself (which is pretty easy - honest!), or use my ... The first thing we need to do is create a. pdb from the.

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