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Case: Can I get access to structure factor data associated with a…
https://www.ccdc.cam.ac.uk/support-and-resources/support/case/?caseid=36aa08d2-52a5-401f-804a-d278338df633The Access Structures service offers three options (Download Modes) for crystal data that may provide structure factor data if available:. ... download and hence make the download faster. -
Downloads - The Cambridge…
https://www.ccdc.cam.ac.uk/support-and-resources/downloadsCSD MOF Collection. Download the CSD MOF Collection by clicking on the download link. ... water.pdb file. Contains the extracted water atoms. Note: to obtain the native protein and ligand files for the Non-native Set you will also need to download the -
Table of Contents Try – it’s your turn!…
https://www.ccdc.cam.ac.uk/media/GOLD-101_handout-1.pdf17 Jan 2023: Materials For this workshop we will use the files that you can download from here. ... Provided Input Files. Please download and unzip the input files from this link. -
Table of Contents Protein-ligand docking with GOLD…
https://www.ccdc.cam.ac.uk/media/Intro-Protein-Ligand-Docking-GLD-001.pdf17 Jan 2023: Materials For this workshop we will use the files that you can download from here. ... Provided Input Files. Please download and unzip the input files from this link. -
Table of Contents Introduction…
https://www.ccdc.cam.ac.uk/media/Documentation/DA3F7A65-A1A6-4C12-AA68-8157ACD1B017/Intro-to-Hermes-tutorial.pdf17 Jan 2023: Material Please download the following folder and extract all files (including 2w5y.pdb). ... HERM-001 3. Visualising and Editing the MLL1 fusion protein Opening Files in Hermes 1. -
Table of Contents Docking with Water in the Binding ...
https://www.ccdc.cam.ac.uk/media/Documentation/4DDADBC4-A645-4E44-AD37-73D09F04C298/GOLD-DockingWater-tutorial.pdf17 Jan 2023: sphere. GLD-006 6. Provided Input Files. Download the files from the link provided in the Materials section on page 3. • ... If you have not already, download the files from the link provided in the Materials section on page 3. -
Table of Contents The Purpose of…
https://www.ccdc.cam.ac.uk/media/Documentation/F660721C-0B58-48E6-A8AE-76DD0803FC3D/GOLD-tutorial-PosePrediction.pdf17 Jan 2023: Please download the example folder of input files. Is this an easy docking? ... MLL1 complexed to SAH cofactor, PDB-code: 2w5y. Download Input Files examples. -
Table of Contents Ensemble Docking…
https://www.ccdc.cam.ac.uk/media/Documentation/0D5504D3-81F2-46D3-9D1D-16787D07F70B/GOLD-tutorial-EnsembleDocking.pdf17 Jan 2023: not treat the set in any kind of ‘averaged’ capacity. Please download the tutorial input files here. ... guidelines for the preparation of input files (Setting Up the Protein(s) and. -
Table of Contents Purpose of Docking…
https://www.ccdc.cam.ac.uk/media/Documentation/EE9787F1-9256-4A91-8264-95371DCD8008/GOLD-tutorial-Flexibility-Constraints.pdf17 Jan 2023: Please download the example files for this tutorial. You will balance flexibility and constraints in two separate docking experiments trying to predict the poses of:. • ... confidence about key interactions. Download Input Files examples. 6. Your -
Table of Contents Introduction…
https://www.ccdc.cam.ac.uk/media/Documentation/E8327590-2CDF-40AF-8092-28B67E58BE72/Ligand_Based_Virtual_Screening_Tutorial.pdf17 Jan 2023: and enrichment metrics will be calculated. Please download the example files here. ... 22 query and write out the resulting screening_molecules and screening_scores files.
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