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(Lec 15 Phase field models)
www.phase-trans.msm.cam.ac.uk/mphil/MP6-15.pdf3 Jan 2011: The phase field methodhas no such detail, but rather relies on a fundamentalapproximation of the thermodynamics of irreversibleprocesses,24–27 that the flux describing the rate isproportional to the force responsible ... Rev. E, 2006, 73E, 066122. 24. L -
This article appeared in a journal published by Elsevier. ...
https://www-wales.ch.cam.ac.uk/Telluride.papers/COSB.20.3.2010.pdf4 Jan 2011: aðq jÞ@q j;g. q j0. 1. 2pn j;g. 24. 35. 2. ... Annu Rev PhysChem 1997, 48:545-600. 24. Miller MA, Wales DJ: Energy landscape of a model protein.J Chem Phys 1999, 111:6610-6616. -
Emergent Complexity from SimpleAnisotropic Building Blocks:…
https://www-wales.ch.cam.ac.uk/Telluride.papers/ACSnano.4.219.2010.pdf4 Jan 2011: Address correspondence todw34@cam.ac.uk. Received for review October 4, 2009and accepted December 24, 2009. ... 24. Wales, D. J. Discrete Path Sampling. Mol. Phys. 2002, 100,3285–3306. -
Rational design of helical architecturesDwaipayan Chakrabarti,…
https://www-wales.ch.cam.ac.uk/Telluride.papers/PNAS.106.20164.2009.pdf4 Jan 2011: geometry. TheBLmGBD potential makes use of the orientation-dependentmolecular shape parameter and the energy parameter tomodel the interaction between two uniaxial oblate ellipsoids(24), each having a single-site representation. ... J Chem Phys 74:3316 -
Transmembrane Structures for Alzheimer’s A�1-42 Oligomers Birgit…
https://www-wales.ch.cam.ac.uk/Telluride.papers/JACS.132.13300.2010.pdf4 Jan 2011: 24) Lal, R.; Lin, H.; Quist, A. Biochimi. Biophys. Acta 2007, 1768, 1966–1975. ... Y. C. Proteins: Struct., Funct., Bioinf. 2008, 72, 1–24. (49) Monette, M.; Lafleur, M. -
DOI : 10.1002/cphc.201000233 Energy Landscapes of Clusters Bound by…
https://www-wales.ch.cam.ac.uk/Telluride.papers/CPC.11.2491.2010.pdf4 Jan 2011: 0892 0.04568 18.0000320936 4 0.0448 0.02298 18.0000240710 12 0.0145 0.00748 18.0000240710 4 0.0426 0.02188 18.0000000700 24 0.0140 0.00718 ... C. A. M. Mooij, D. Frenkel, H. N. W. Lekker-. kerker, Nature 1993, 365, 425.[24] A. -
pcbi.1000835 1..12
https://www-wales.ch.cam.ac.uk/Telluride.papers/PLOSCP.6.e1000835.2010.pdf4 Jan 2011: folding temperature to the glass transition temperature [23,24]. The resulting database contained 212054 minima and 206923. ... protein folding. Proc Natl Acad Sci USA 84: 7524. 24. Goldstein RA, Luthey-Schulten ZA, Wolynes PG (1992) Optimal -
Space-time properties of Gram-Schmidt vectors in classical…
https://www-wales.ch.cam.ac.uk/Telluride.papers/526.%20Green,JJ%20PRE'10%20copy.pdf4 Jan 2011: S. Berry, J. Phys. B 24, L351 1991. 10 B. Eckhardt and D. ... Many-Particle Lyapunov Vectors 2004 http://arxiv.org/abs/nlin/0404028. 24 H. Abarbanel, R. Brown, and M. -
Principal component analysis of potential energy surfaces of large…
https://www-wales.ch.cam.ac.uk/Telluride.papers/528.%20PCCP%20Panahi'09,wSuppl.pdf4 Jan 2011: matrix can be replaced with similar matrices, such as correlation or sums-of-squares-cross-products (SSCP),24 depending on the application. -
D O W N I N G C O ...
https://www.dow.cam.ac.uk/sites/default/files/accounts10.pdf5 Jan 2011: Investment Portfolio 25,211,440 24,162,211 29,162,939. Spending Rule Amount 1,497,688 1,830,995 1,774,218. ... Modern Languages 10 5 5 4 24 19. Music 2 0 0 0 2 0. -
Alkane Global Minima
https://www-jmg.ch.cam.ac.uk/stuff/alkanes/short.html6 Jan 2011: Formula. Energy. Structure. Formula. Energy. Structure. C. 11. H. 24. 28.11. ... 16. 17.24. C. 3. H. 8. 6.27. C. 8. H. 18. -
Butane Energy
https://www-jmg.ch.cam.ac.uk/stuff/alkanes/c4.html6 Jan 2011: C(sp3) 65 11 14 4.6000 1.1130 1.1144 0.003 O1 0 H-C(sp3) 65 ANGLES, BEND AND STRETCH BEND ENERGIES 24 Bend interactions present -------------------------------------- Atom Numbers -
Dynamic Catalyst Restructuring during Carbon Nanotube Growth
www-g.eng.cam.ac.uk/nms/publications/pdf/nn102118y.pdf6 Jan 2011: We alsotested the Ni (001)graphene system because it has been re-ported that a single C atom is strongly attracted to the Ni(001)surface.24 For the graphene ... 24. Borjesson, A.; Zhu, W.; Amara, H.; Bichara, C.; Bolton, K.Computational Studies of -
Annual Review 2010 From the Pro-Vice-Chancellor(Research) This year…
https://www.enterprise.cam.ac.uk/wp-content/uploads/2015/04/2009-2010-annual-review-final.pdf6 Jan 2011: 97 IP transactions signed:73 for commercial purposes and 24 for other purposes, including research licences. ... Over the past year,48 IP agreements were signed off in the Physical Sciences – 24 research licences and 24 licences. -
Pub lishe d by Man ey P ublis hing ...
www.phase-trans.msm.cam.ac.uk/2011/fatigue_Peet_MST_2011.pdf9 Jan 2011: Mater. Sci. Jpn, 1980, 29, 24–29. 11. G. Chalant and B. -
PART II REPRESENTATION THEORYSHEET 2 Unless otherwise stated, all ...
https://www.dpmms.cam.ac.uk/study/II/RepresentationTheory/2010-2011/repex2.pdf10 Jan 2011: 24 = g5.]. 1. 2 PART II REPRESENTATION THEORY SHEET 2. ... 1 21 42 56 24 24α 14 2 0 1 0 0β 15 1 1 0 1 1γ 16 0 0 2 2 2. -
PART II REPRESENTATION THEORYSHEET 4 Unless otherwise stated, all ...
https://www.dpmms.cam.ac.uk/study/II/RepresentationTheory/2010-2011/repex4.pdf10 Jan 2011: 8 Suppose we are given that H is a subgroup of order 24 in G. -
https://www.dpmms.cam.ac.uk/study/II/StatisticalModelling/2010-2011/we…
https://www.dpmms.cam.ac.uk/study/II/StatisticalModelling/2010-2011/weld.txt12 Jan 2011: 23 5.9 9.24 5.8 9.24 6.1 9.61 6.3 9.60 6.4 9.61 6.2. -
Events, courses, etc. - Cambridge University Reporter 6209
https://www.reporter.admin.cam.ac.uk/reporter/2010-11/weekly/6209/section4.shtml12 Jan 2011: Open classes in Modern Hebrew: Notice. Open classes for the foundation course in Modern Hebrew will continue on 24 January. ... Monday, 24 January. (5 p.m. to 6.30 p.m., in room GS4). -
Notices - Cambridge University Reporter 6209
https://www.reporter.admin.cam.ac.uk/reporter/2010-11/weekly/6209/section1.shtml12 Jan 2011: 24 January, Monday. End of first quarter of Lent Term. 25 January, Tuesday. ... In 2011 these are:. 24 April. Easter Day. 2 June. Ascension Day. -
Vacancies, appointments, etc. - Cambridge University Reporter 6209
https://www.reporter.admin.cam.ac.uk/reporter/2010-11/weekly/6209/section2.shtml12 Jan 2011: Quote reference: EA07596. Closing date: 24 January 2011. Departmental Secretary (Maternity Cover) in the Language Centre. -
Graces - Cambridge University Reporter 6209
https://www.reporter.admin.cam.ac.uk/reporter/2010-11/weekly/6209/section10.shtml12 Jan 2011: Regulations 22–25 (Henry Arthur Thomas Research Foundation Fund). By renumbering the regulations as 21–24 respectively. -
Acta - Cambridge University Reporter 6209
https://www.reporter.admin.cam.ac.uk/reporter/2010-11/weekly/6209/section11.shtml12 Jan 2011: 360–61) were approved at 4 p.m. on Friday, 24 December 2010. -
Unbekannt
https://www-wales.ch.cam.ac.uk/Telluride.papers/rlj_04_8.pdf13 Jan 2011: Name Length E Sequence. HP-20 20 )9 HPHP2H2PHP2HPH2P2HPHHP-24 24 )9 H2P2ðHP2Þ6H2HP-25 25 )8 P2HP2ðH2P4Þ3H2HP-36 36 )14 P3H2P2H2P5H7P2H2P4H2P2HP2HP-48 48 )23 P2HðP2H2Þ2P5H10P6ðH2P2Þ2HP2H5HP-50 50 )21 H2ðPHÞ3PH4PðHP3Þ3PðHP3Þ2HPH4ðPHÞ4H. -
How many dimensions are required to approximate the potential ...
https://www-wales.ch.cam.ac.uk/Telluride.papers/rlj_05_1.pdf13 Jan 2011: Chem. Phys. 122, 084714 2005! Downloaded 24 Mar 2005 to 147.188.105.99. ... J. Chem. Phys. 122, 084714 2005! Downloaded 24 Mar 2005 to 147.188.105.99. -
THE JOURNAL OF CHEMICAL PHYSICS 124, 204714 �2006� Analyzing ...
https://www-wales.ch.cam.ac.uk/Telluride.papers/rlj_06_1.pdf13 Jan 2011: Name Sequence EGM DGM. HP-20 HPHPPHHPHPPHPHHPPHPH 9 2HP-20a HPHHPPHPHPPHPHPHPHPH 8 17HP-24 HHPPHPP6HH 9 19HP-25 PPHPPH2P43HH 8 16HP-36 P3H2P2H2P5H7P2H2P4H2P2HP2 14 192HP-48 P2HP2H22P5H10P6H2P22HP2H5 23 285HP-50 H2PH3PH4PHP33PHP32HPH4PH4H ... 24 -
No Job Name
https://www-wales.ch.cam.ac.uk/Telluride.papers/rlj_06_4.pdf13 Jan 2011: This model isclosely related to the “void model” for structural changes andmelting of clusters.24. ... A.; Wales, D. J.J. Chem. Phys.2004, 121, 6689.(24) Berry, R. S.; Smirnov, B. -
Topographical complexity of multidimensional energy landscapes Tamiki …
https://www-wales.ch.cam.ac.uk/Telluride.papers/rlj_06_5.pdf13 Jan 2011: Our landscape and path complexity. measures are quite general, irrespective of the kinds of energy[i.e., potential or free energy (9, 24)] and model. ... Wales DJ, Dewsbury PEJ (2004) J Chem Phys 121:10284.24. Evans DA, Wales DJ (2003) J Chem Phys -
Phase diagram of Hertzian spheresJosep C. Pàmies,1,a� Angelo…
https://www-wales.ch.cam.ac.uk/Telluride.papers/DF.JCP.131.044514.2009.pdf13 Jan 2011: 4.046 4.050F-FCC 200 5.000 24.15 1.531 1.602 H-F 270 3.704 767.4 4.579 4.518F-BCC 125 8.000 44.75 ... 24 D. Frenkel and A. J. C. Ladd, J. Chem. Phys. -
c0sm00567c 6136..6145
https://www-wales.ch.cam.ac.uk/Telluride.papers/DF.SoftMatter.6.6136.2010.pdf13 Jan 2011: bPV ln. QGmVT expðbAl0;n0Þ2. (24). Acknowledgements. This work was supported by the ERC (Advanced Grant agree-. ... 13 N. Geerts, T. Schmatko and E. Eiser, Langmuir, 2008, 24(9), 5118–5123. -
music fair lt11
https://www.sel.cam.ac.uk/sites/default/files/assets/chapel/music%20fair%20lt11.pdf13 Jan 2011: Sunday 30 January INTROIT Senex puerum portabat – Victoria 156 – Diva servatrix (288) PRESENTATION OF CHRIST PSALM 24 157 – Old 120th IN THE TEMPLE (tr.) MASS SETTING Missa Bell’ amfitrit’ altera – Lassus ... Thursday 24 February PSALM 119: 33 -
annual record 2010 Tr in iT y College cambridge ...
https://www.trin.cam.ac.uk/download/trinity-college-annual-record-2010/?wpdmdl=29303&refresh=6640b13abfdcb171551570613 Jan 2011: T R I N I T Y A N N UA L R EC OR D 2010 24. -
annual record 2010 Tr in iT y College cambridge ...
https://www.trin.cam.ac.uk/download/trinity-college-annual-record-2010/?wpdmdl=29303&refresh=6640b13ab11421715515706&ind=0&filename=trinity_record_2010.pdf13 Jan 2011: T R I N I T Y A N N UA L R EC OR D 2010 24. -
DNA Nanotweezers Studied with a Coarse-Grained Model of DNA ...
https://www-wales.ch.cam.ac.uk/Telluride.papers/prl10.pdf14 Jan 2011: 30 APRIL 2010. 178101-2. eight bases provide a ‘‘toehold’’ for binding of the antifuelf, which is also 24 bases long and complementary to thewhole of f. ... 60. 0,0 0,8 0,16 8,16 16,8 24,0. Free. Ene. rgy. / kT. -
Reversible self-assembly of patchy particles into…
https://www-wales.ch.cam.ac.uk/Telluride.papers/jcp07b.pdf14 Jan 2011: Since high temperatures are equivalent to weakbonding interactions, this finding is consistent with the ex-perimental observation that protein-protein interactions in vi-rus capsids are generally weak.24. ... M. Teschke, J. Mol. Biol. 365,513 2007. 24 A. -
Templated self-assembly of patchy particles Alexander J Williamson,a…
https://www-wales.ch.cam.ac.uk/Telluride.papers/softmatter10.pdf14 Jan 2011: 24,57. In the model, the repulsion between particles i and j isbased upon an isotropic Lennard-Jones potential. ... C. Rapaport, Phys. Rev. Lett., 2008, 101, 186101.24 A. W. Wilber, J. -
The stability of a crystal with diamond structure for ...
https://www-wales.ch.cam.ac.uk/Telluride.papers/jcp10.pdf14 Jan 2011: The stability of a crystal with diamond structure for patchy particleswith tetrahedral symmetry. Eva G. Noya,1,a Carlos Vega,2 Jonathan P. K. Doye,3 and Ard A. Louis41Instituto de Química Física Rocasolano, Consejo Superior de Investigaciones -
rsc_cp_b614955c 2197..2205
https://www-wales.ch.cam.ac.uk/Telluride.papers/pccp07.pdf14 Jan 2011: Zukoski, J. Chem. Phys., 2002, 117, 8540.24 X. Song, Phys. Rev. -
RESEARCH ARTICLE Translationally optimal codons associate with…
www-vendruscolo.ch.cam.ac.uk/lee10p.pdf16 Jan 2011: Escherichia coli: selection for translational accuracy. Mol. Biol. Evol. 2007, 24, 374–381. ... boundaries in mammals. Mol. Biol. Evol. 2007, 24,. 1600–1603. [31] Warnecke, T., Hurst, L. -
Transient Tertiary Structure Formation within the RibosomeExit Port…
www-vendruscolo.ch.cam.ac.uk/obrien10jacs.pdf16 Jan 2011: Sci. 2009, 34, 16–24.(8) Guo, Z. Y.; Thirumalai, D. Biopolymers 1995, 36, 83–102.(9) Dobson, C. ... J. Mol. Biol. 2009, 387, 502–517.(24) Kosolapov, A.; Deutsch, C. Nat. -
B905825g 277..291
www-vendruscolo.ch.cam.ac.uk/vendruscolo09fd.pdf16 Jan 2011: related phenotypes may be measured allows us to quantify the linksbetween the in vivo toxicity of protein aggregates and the fundamental chemicalproperties of peptides and proteins.24,41,73,74. ... Sci., 1999, 24,329–332. 29 T. R. Jahn and S. E. Radford -
npgrj_nsmb_1562 318..324
www-vendruscolo.ch.cam.ac.uk/friel09nsmb.pdf16 Jan 2011: In(k. ob. s). 0.6. 0.4. 0.2. 0.001 0.01Time (s). 4 6 2 24 46. ... J. Mol. Biol. 366,1001–1015 (2007). 24. Fersht, A.R. Nucleation mechanisms in protein folding. -
RSC_mb_C005160H 1..8
www-vendruscolo.ch.cam.ac.uk/pechmann10mbs.pdf16 Jan 2011: Welland andC. M. Dobson, Science, 2009, 326, 1533–1537. 24 A. Wagner, J. ... M. Dobson, Trends Biochem. Sci., 1999, 24, 329–332.70 A. de Marco, E. -
Structural characterization of a misfolded intermediate populated…
www-vendruscolo.ch.cam.ac.uk/gianni10nsmb.pdf16 Jan 2011: Reliable Φ values were calculated for 24 variants (ΔΔGN–D > 0.5 kcal mol1, ref. ... 24. Liao, D.I., Qian, J., Chisholm, D.A., Jordan, D.B. & Diner, B.A. -
Intrinsic Determinants of Neurotoxic Aggregate Formation by the…
www-vendruscolo.ch.cam.ac.uk/brorsson10bj.pdf16 Jan 2011: in long-term potentiation and synaptic loss (24,25). There-. fore, it appears possible that the I31E mutation can substan-. ... Sci. 24:329–332. 3. Knowles, T. P., A. W. Fitzpatrick,. , M. -
Accurate Determination of Interstrand Distances and Alignment in…
www-vendruscolo.ch.cam.ac.uk/caporini10jpcb.pdf16 Jan 2011: Since a single labeled site in an amyloid fibril monomerforms an extended linear chain of spins when packed into a-sheet fibril, we introduce periodic boundary conditions23,24 intothe simulations to ... chain of infiniteextent and to reduce the -
Efficient identification of near-native conformations in ab initio…
www-vendruscolo.ch.cam.ac.uk/wolff10p.pdf16 Jan 2011: RMSD and TM-score (also based on Ca atoms).24 The. root mean square deviation (RMSD) is perhaps the most. ... 7:180. 24. Zhang Y, Skolnick J. Scoring function for automated assessment of. -
Proteome-Level Interplay between Folding and Aggregation Propensities …
www-vendruscolo.ch.cam.ac.uk/tartaglia10jmb2.pdf16 Jan 2011: have suggested that there should be a competitionbetween folding and aggregation,16,19–24 in the sensethat, in order to avoid aggregation, the regions of theamino acid sequence that are highly ... values and have coefficient ofcorrelations of, -
Enzymatic activity in disordered states of proteins
www-vendruscolo.ch.cam.ac.uk/vendruscolo10cocb.pdf16 Jan 2011: Acc Chem Res 2001,34:938-945. 24. Benkovic SJ, Hammes-Schiffer S: A perspective on enzymecatalysis. -
Thursday Seminars on Theoretical Geophysics
www.itg.cam.ac.uk/seminars/thu_2.05/lent_2011.html17 Jan 2011: 24 February. MR9. Thierry Alboussiere. (ENS Lyon). The 'not so quiet' inner core.
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