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search results for p53 |u:supfam.mrc-lmb.cam.ac.uk
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p53 tetramerization domain Fold
https://supfam.mrc-lmb.cam.ac.uk/scop/47718Toggle navigation. Go. p53 tetramerization domain. Superfamily. Families. Domains. 5. 2. -
p53 tetramerization domain Family
https://supfam.mrc-lmb.cam.ac.uk/scop/47720Toggle navigation. Go. p53 tetramerization domain. Domain. Species. Proteins. 1. 54. -
Tumor suppressor p53 fragments Superfamily
https://supfam.mrc-lmb.cam.ac.uk/scop/58744Toggle navigation. Go. Tumor suppressor p53 fragments. Family. Domains. Species. 2. -
p53 tetramerization domain Superfamily
https://supfam.mrc-lmb.cam.ac.uk/scop/47719Toggle navigation. Go. p53 tetramerization domain. Family. Domains. Species. -
p53 DNA-binding domain-like Family
https://supfam.mrc-lmb.cam.ac.uk/scop/81314Toggle navigation. Go. p53 DNA-binding domain-like. Domain. Species. Proteins. 2. 49. -
Tumor suppressor p53 fragments Fold
https://supfam.mrc-lmb.cam.ac.uk/scop/58743Toggle navigation. Go. Tumor suppressor p53 fragments. Superfamily. Families. Domains. 1. -
p53-like transcription factors Superfamily
https://supfam.mrc-lmb.cam.ac.uk/scop/49417Toggle navigation. Go. p53-like transcription factors. Family. Domains. Species. 3. 5. -
Common fold of diphtheria toxin/transcription factors/cytochrome f…
https://supfam.mrc-lmb.cam.ac.uk/scop/49379Toggle navigation. Go. Common fold of diphtheria toxin/transcription factors/cytochrome f. Superfamily. Families. Domains. 1. 1. 19. 13. 15. 16. 1. 2. 7. 19. 1. 1. 3. 2. 1. 2. 2. 2. 1. 1. Please cite: Gough, J., Karplus, K., Hughey, R. and Chothia, C -
Peptides Class
https://supfam.mrc-lmb.cam.ac.uk/scop/58231Toggle navigation. Go. Peptides. Fold. Superfamilies. Families. 1. 2. 1. 3. 1. 8. 1. 5. 1. 2. 1. 1. 3. 3. 1. 1. 7. 7. 1. 1. 1. 1. 1. 1. 1. 1. 1. 1. 1. 1. 1. 1. 1. 1. 1. 1. 1. 2. 1. 1. 1. 1. 1. 1. 1. 1. 1. 1. 1. 1. 1. 1. 1. 1. 1. 1. 1. 1. 1. 7. 1. 2. -
SCOPe Family
https://supfam.mrc-lmb.cam.ac.uk/scop/-14961Toggle navigation. Go. SCOPe. Domain. Species. Proteins. 1. 1. Please cite: Gough, J., Karplus, K., Hughey, R. and Chothia, C. (2001). "Assignment of Homology to Genome Sequences using a Library of Hidden Markov Models that Represent all Proteins of -
All alpha proteins Class
https://supfam.mrc-lmb.cam.ac.uk/scop/46456Toggle navigation. Go. All alpha proteins. Fold. Superfamilies. Families. 2. 36. 20. 73. 1. 33. 14. 263. 9. 23. 1. 12. 16. 25. 11. 17. 1. 5. 2. 2. 2. 10. 1. 1. 1. 1. 1. 4. 1. 1. 1. 3. 1. 2. 1. 1. 1. 1. 1. 3. 1. 8. 1. 4. 7. 9. 28. 55. 6. 60. 1. 6. 1. -
SCOPe Family
https://supfam.mrc-lmb.cam.ac.uk/scop/-9497Toggle navigation. Go. SCOPe. Domain. Species. Proteins. 1. 1. Please cite: Gough, J., Karplus, K., Hughey, R. and Chothia, C. (2001). "Assignment of Homology to Genome Sequences using a Library of Hidden Markov Models that Represent all Proteins of -
SCOPe Family
https://supfam.mrc-lmb.cam.ac.uk/scop/-12941Toggle navigation. Go. SCOPe. Domain. Species. Proteins. 1. 1. Please cite: Gough, J., Karplus, K., Hughey, R. and Chothia, C. (2001). "Assignment of Homology to Genome Sequences using a Library of Hidden Markov Models that Represent all Proteins of -
https://supfam.mrc-lmb.cam.ac.uk/SUPERFAMILY/function/scop.annotation.…
https://supfam.mrc-lmb.cam.ac.uk/SUPERFAMILY/function/scop.annotation.1.69.txt13 Dec 2016: bacterial conjugation FinO LA 49417 sf b.2.5 - p53-like transcription factors LA 49879 sf b.26.1 - SMAD/FHA domain LA 50723 sf b.54.1 - Core binding factor ... NONA 58739 sf j.68.1 - Fragments of the L-type calcium channel alpha subunit Cav.1 -
SCOPe Family
https://supfam.mrc-lmb.cam.ac.uk/scop/-10453Toggle navigation. Go. SCOPe. Domain. Species. Proteins. 1. 1. Please cite: Gough, J., Karplus, K., Hughey, R. and Chothia, C. (2001). "Assignment of Homology to Genome Sequences using a Library of Hidden Markov Models that Represent all Proteins of -
T-box Family
https://supfam.mrc-lmb.cam.ac.uk/scop/81316Toggle navigation. Go. T-box. Domain. Species. Proteins. 1. 2. 1. 2. Please cite: Gough, J., Karplus, K., Hughey, R. and Chothia, C. (2001). "Assignment of Homology to Genome Sequences using a Library of Hidden Markov Models that Represent all -
STAT DNA-binding domain Family
https://supfam.mrc-lmb.cam.ac.uk/scop/81317Toggle navigation. Go. STAT DNA-binding domain. Domain. Species. Proteins. 1. 1. 1. 1. 1. 2. Please cite: Gough, J., Karplus, K., Hughey, R. and Chothia, C. (2001). "Assignment of Homology to Genome Sequences using a Library of Hidden Markov Models -
RUNT domain Family
https://supfam.mrc-lmb.cam.ac.uk/scop/81318Toggle navigation. Go. RUNT domain. Domain. Species. Proteins. 2. 22. Please cite: Gough, J., Karplus, K., Hughey, R. and Chothia, C. (2001). "Assignment of Homology to Genome Sequences using a Library of Hidden Markov Models that Represent all -
DNA-binding domain from NDT80 Family
https://supfam.mrc-lmb.cam.ac.uk/scop/81992Toggle navigation. Go. DNA-binding domain from NDT80. Domain. Species. Proteins. 1. 16. Please cite: Gough, J., Karplus, K., Hughey, R. and Chothia, C. (2001). "Assignment of Homology to Genome Sequences using a Library of Hidden Markov Models that -
SAP domain Family
https://supfam.mrc-lmb.cam.ac.uk/scop/68907Toggle navigation. Go. SAP domain. Domain. Species. Proteins. 1. 2. 1. 2. 1. 1. 1. 1. 1. 1. 1. 1. 1. 1. Please cite: Gough, J., Karplus, K., Hughey, R. and Chothia, C. (2001). "Assignment of Homology to Genome Sequences using a Library of Hidden -
Tudor domain Family
https://supfam.mrc-lmb.cam.ac.uk/scop/63749Toggle navigation. Go. Tudor domain. Domain. Species. Proteins. 1. 2. 1. 26. 2. 2. 1. 20. 1. 1. 1. 3. 2. 2. Please cite: Gough, J., Karplus, K., Hughey, R. and Chothia, C. (2001). "Assignment of Homology to Genome Sequences using a Library of Hidden -
Rel/Dorsal transcription factors, DNA-binding domain Family
https://supfam.mrc-lmb.cam.ac.uk/scop/81315Toggle navigation. Go. Rel/Dorsal transcription factors, DNA-binding domain. Domain. Species. Proteins. 1. 23. 2. 14. 1. 2. 3. 16. 1. 1. 1. 2. Please cite: Gough, J., Karplus, K., Hughey, R. and Chothia, C. (2001). "Assignment of Homology to Genome -
DNA-binding protein LAG-1 (CSL) Family
https://supfam.mrc-lmb.cam.ac.uk/scop/110080Toggle navigation. Go. DNA-binding protein LAG-1 (CSL). Domain. Species. Proteins. 1. 4. Please cite: Gough, J., Karplus, K., Hughey, R. and Chothia, C. (2001). "Assignment of Homology to Genome Sequences using a Library of Hidden Markov Models that -
https://supfam.mrc-lmb.cam.ac.uk/SUPERFAMILY/function/scop.annotation.…
https://supfam.mrc-lmb.cam.ac.uk/SUPERFAMILY/function/scop.annotation.1.73.txt13 Dec 2016: 4.12 - TrpR-like LA 48657 sf a.136.1 - Repressor of bacterial conjugation FinO LA 49417 sf b.2.5 - p53-like transcription factors LA 49879 sf b.26.1 - ... 58744 sf j.69.1 - Tumor suppressor p53 fragments NONA 58749 sf j.70.1 - FxFG nucleoporin repeats -
https://supfam.mrc-lmb.cam.ac.uk/SUPERFAMILY/dcGO/dcGOnet/scop_info.tx…
https://supfam.mrc-lmb.cam.ac.uk/SUPERFAMILY/dcGO/dcGOnet/scop_info.txt15 Mar 2019: 1 47719 p53 tetramerization domain a.55.1 47729 IHF-like DNA-binding proteins a.56.1 47741 CO dehydrogenase ISP C-domain like a.59.1 47762 PAH2 domain ... receptor domain b.2.5 49417 p53-like transcription factors b.2.7 49447 Second domain of Mu2 adaptin -
https://supfam.mrc-lmb.cam.ac.uk/SUPERFAMILY/Domain2GO/SDFO.all.txt
https://supfam.mrc-lmb.cam.ac.uk/SUPERFAMILY/Domain2GO/SDFO.all.txt8 Jun 2016: #Created at 3/04/2016 14:38:15 (day/month/year hour:min:sec) Domain_type GO_id GO_name GO_subontology SDFO_level sf GO:0016787 hydrolase activity molecular_function Least Informative sf GO:0097159 organic cyclic compound binding molecular_function -
https://supfam.mrc-lmb.cam.ac.uk/SUPERFAMILY/Domain2GO/Domain2GO_suppo…
https://supfam.mrc-lmb.cam.ac.uk/SUPERFAMILY/Domain2GO/Domain2GO_supported_by_both.txt8 Jun 2016: #Created at 3/04/2016 14:38:13 (day/month/year hour:min:sec) Domain_type Domain_sunid GO_id GO_name GO_subontologies Information_content Annotation_origin (Direct:1, Inherited:0) sf 53649 GO:0008484 sulfuric ester hydrolase activity -
An Atlas of Combinatorial Transcriptional Regulation in Mouse and Man
https://supfam.mrc-lmb.cam.ac.uk/bioinformatics/people/julian_gough/publications/ravasi_cell_2010.pdf12 Apr 2010: activate NOTCH pathways resulting in p53-dependent cell-cycle. arrest (Ban et al., 2008). ... EWS-FLI1 suppresses NOTCH-activated p53 in Ewing’s sarcoma. Cancer. Res. 68, 7100–7109. -
bic483a
https://supfam.mrc-lmb.cam.ac.uk/bioinformatics/people/julian_gough/publications/chothia_biochem_2009.pdf11 Mar 2009: Figure 6 Changes in protein stability produced by observed mutations. Changes in protein stability produced by engineered mutations that mimic native mutationsseen in barnase [29], p53 [31] and GroEL [32]. ... its mutation back to the consensus residue -
ssn044 800..815
https://supfam.mrc-lmb.cam.ac.uk/bioinformatics/people/julian_gough/publications/zeng_molplant_2008.pdf2 Sep 2008: Molecular Plant • Volume 1 • Number 5 • Pages 800–815 • September 2008 RESEARCH ARTICLE. Classification, Expression Pattern, and E3 LigaseActivity Assay of Rice U-Box-Containing Proteins. Li-Rong Zenga,b,2, Chan Ho Parka,2, R.C. Venua, -
A promoter-level mammalian expression atlas
https://supfam.mrc-lmb.cam.ac.uk/bioinformatics/people/julian_gough/publications/forrest_nature_2014.pdf19 Mar 2014: p1@T. P53. p2@TRMT5. p2@T. RMT5. p1@TRMT5. p1@T. RMT5. p1@H19. p1@H. 19.
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