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pub:neuroanatomy:fru:template_brains - Jefferis Lab DokuWiki
flybrain.mrc-lmb.cam.ac.uk/dokuwiki/doku.php?id=pub:neuroanatomy:fru:template_brainsThe output file of the avg_adm tool was used as the new template to which each image was registered. ... The avg_adm command was again called and its output was the new Intersex template. -
software:amira:grouping_surface_regions - Jefferis Lab DokuWiki
flybrain.mrc-lmb.cam.ac.uk/dokuwiki/doku.php?id=software:amira:grouping_surface_regionsOn the Groupings panel select New Group and give it a name. ... The order is harder to change - one must redefine the groups from start to finish by selecting the group, creating a new group from it and then deleting the old one. -
flybrain.mrc-lmb.cam.ac.uk/dokuwiki/doku.php?do=export_raw&id=soft…
flybrain.mrc-lmb.cam.ac.uk/dokuwiki/doku.php?do=export_raw&id=software:amira:developerSetting up AmiraDev to compile Felix's source hxskeletonize/hxgrapheditor ====== Amira 5.2.2 ====== Use Wizard to make a new amiradev folder e.g. -
NBLAST
flybrain.mrc-lmb.cam.ac.uk/si/nblast/www/rss.xml13 Jul 2019: layout: post category : pages tags : [how-to, jekyll] ---. contents. </code></pre> <p>Three hyphens on a new line start the Front-Matter block and three hyphens on a new line end -
software:amira:hxskeletonize - Jefferis Lab DokuWiki
flybrain.mrc-lmb.cam.ac.uk/dokuwiki/doku.php?id=software:amira:hxskeletonizeTop Tips. You may need to move the tracing toolbar to a new location (e.g. -
warping_manual:registration_gui - Jefferis Lab DokuWiki
flybrain.mrc-lmb.cam.ac.uk/dokuwiki/doku.php?id=warping_manual:registration_guiHit OK - this creates a small script in /yourregistrationfolder/commands. Navigate to the /yourregistrationfolder/commands folder, you will find a new file called munger_<todays date>_<time file created>.command, double -
flybrain.mrc-lmb.cam.ac.uk/dokuwiki/doku.php?do=export_raw&id=star…
flybrain.mrc-lmb.cam.ac.uk/dokuwiki/doku.php?do=export_raw&id=startERC Consolidator Grant NeuroNex2 (see https://neuronex.org/news/13) Wellcome Trust (Collaborative Award, see http://www.zoo.cam.ac.uk/research/groups/connectomics) Wellcome Trust ([[http://virtualflybrain.org|VFB]] - Biomedical -
flybrain.mrc-lmb.cam.ac.uk/dokuwiki/doku.php?do=export_raw&id=pub:…
flybrain.mrc-lmb.cam.ac.uk/dokuwiki/doku.php?do=export_raw&id=pub:neuroanatomy:fru:faqsmachine) PC: eSATA for excellent performance on new PCs USB2.0 slow, but very cheap and works on all machines. -
warping_manual:plotting_3d_objects_in_r - Jefferis Lab DokuWiki
flybrain.mrc-lmb.cam.ac.uk/dokuwiki/doku.php?id=warping_manual:plotting_3d_objects_in_rThis is clearly a bit naff. So in the past what I did was manually multiply all y and z coordinates by -1 to end up with a new object that -
NBLAST
flybrain.mrc-lmb.cam.ac.uk/si/nblast/www/atom.xml13 Jul 2019: layout: post category : pages tags : [how-to, jekyll] ---. contents. </code></pre> <p>Three hyphens on a new line start the Front-Matter block and three hyphens on a new line end
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