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Finding the mAL Neurons
flybrain.mrc-lmb.cam.ac.uk/si/nblast/knitr/mAL.html3 Apr 2015: Let’s cluster those and see what we have. hcmal=hclustfc(mals). ## The "ward" method has been renamed to "ward.D"; note new "ward.D2". ... The "ward" method has been renamed to "ward.D"; note new "ward.D2". -
NBLAST_search
flybrain.mrc-lmb.cam.ac.uk/si/nblast/knitr/NBLAST_search.html3 Apr 2015: R/R18C12_voxdims.am", format='hxlineset', F=T) #resave with new name #R18C12=read.neuron(f="/GD/LMBD/Papers/2012NBlast/R/R18C12_voxdims.am") -
VPNNeuronClusters
flybrain.mrc-lmb.cam.ac.uk/si/nblast/knitr/VPNNeuronClusters.html3 Apr 2015: Names = c("FOV", "userMatrix", "scale", "zoom")) par3d(op) plot3d(g123_aotu_pvlp,col="black") plot3d(g123, col="lightgrey"). Generate new score matrix based on neuron segments in AOTU and PVLP. ... gn2]). Hierarchical clustering of these neurons with new -
Auditory Interneurons
flybrain.mrc-lmb.cam.ac.uk/si/nblast/knitr/FullAudInterneuronAnalysis.html3 Apr 2015: Remove outliers (LN without long cell body neurite). Cluster and divide this new type:. ... These 2 groups might represent 2 subtypes of new AMMC local neurons.
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