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  2. ProSHADE: src/proshade/ProSHADE_descriptors.cpp Source File

    https://www2.mrc-lmb.cam.ac.uk/groups/murshudov/content/proshade/doxygen/df/d91/_pro_s_h_a_d_e__descriptors_8cpp_source.html
    1 Nov 2018: 251 for ( unsigned int shIt = 0; shIt < this->_noShellsWithData; shIt++ ). 252 {. 253 this->_rrpMatrices[bwIt][shIt] = new double [this->_noShellsWithData];. ... lIter++ ). 502 {. 503 this->_trSigmaEMatrix[bandUsageIndex][lIter] = new std::array<double,2>

  3. mbar-v2

    https://www2.mrc-lmb.cam.ac.uk/personal/pemsley/coot/files/presentations/mbar-v2.pdf
    31 Aug 2018: proceed. 2.2.3.The new waters have been added to chain D, and it is important to inspect them and make sure that they have all been added in appropriate

  4. Coot: Model-building tools for Molecular Graphics

    https://www2.mrc-lmb.cam.ac.uk/personal/pemsley/coot/files/presentations/bgu/coot-2018-bgu.pdf
    22 Feb 2018: 4 PHE Rotamers. Previous. TraditionalBackrub. Helix-Building. Alpha Helix Placement. Scenario: Looking at a new map, not built with automatic tools: “I can see that there’s a helix here - ... Why are they different? or new NCS Differences graph.

  5. Cryo-EM reconstruction of AlfA from Bacillus subtilis reveals the…

    https://www2.mrc-lmb.cam.ac.uk/groups/JYL/PDF/AlfA2018.pdf
    20 Mar 2018: The antiparallel orientation of the. filaments is necessary to ensure that when new protomers areadded to the spindle, it grows in opposite directions and pushes theplasmid copies apart (23). ... FASEB J 9:167–174.36. Krissinel E, Henrick K (2004)

  6. Interactive Tools forCryo-EM Map Fitting Paul EmsleyMRC Laboratory of …

    https://www2.mrc-lmb.cam.ac.uk/personal/pemsley/coot/files/presentations/coot-cryoEM-2018-June-PSI.pdf
    19 Jun 2018: Yeast Mitochondrial Large Ribosomal Subunit. 19/06/18. New Ribosome Components. blue: conservedred: found in bothyellow: yeast only. ... Lots to see at 4 rmsd. Alpha Helix Placement. Scenario: Looking at a new map, not built with automatic tools: “I

  7. Coot Tools for Cryo-EM Paul EmsleyMRC Laboratory of Molecular ...

    https://www2.mrc-lmb.cam.ac.uk/personal/pemsley/coot/files/presentations/coot-cryoEM-2018-Aug-Stockholm.pdf
    15 Aug 2018: Lots to see at 4 rmsd. Alpha Helix Placement. Scenario: Looking at a new map, not built with automatic tools: “I can see that there’s a helix here - build ... New/Bleeding Edge/Still-in-Development. The New Ramachandran Plot. EMD-0144:1.65 Å

  8. ProSHADE: ProSHADE_internal::ProSHADE_data Class Reference

    https://www2.mrc-lmb.cam.ac.uk/groups/murshudov/content/proshade/doxygen/d1/dee/class_pro_s_h_a_d_e__internal_1_1_pro_s_h_a_d_e__data.html
    1 Nov 2018: For each box passing the tests, it then creates a new ProSHADE_data object in a vector of such objects it returns.

  9. ProSHADE: src/proshade/ProSHADE.cpp Source File

    https://www2.mrc-lmb.cam.ac.uk/groups/murshudov/content/proshade/doxygen/d4/d4f/_pro_s_h_a_d_e_8cpp_source.html
    1 Nov 2018: 1365 ProSHADE_internal::ProSHADE_distances db = new ProSHADE_internal::ProSHADE_distances ( setUp );. 1366 delete db;.

  10. Journal of Visualized Experiments www.jove.com Copyright © 2018…

    https://www2.mrc-lmb.cam.ac.uk/groups/JYL/PDF/JOVE2018.pdf
    19 Apr 2018: protein droplets (each row now requires 8 new microsyringesto avoid cross-contamination).

  11. Prokaryotic cytoskeletons: protein filaments organizing small cells

    https://www2.mrc-lmb.cam.ac.uk/groups/JYL/PDF/nrmicro.2017.153.pdf
    18 Jan 2018: as well as entirely new classes of filaments16–18, leading to an expanded concept of what a cytoskeleton is (BOX 1). ... In many rod‑shaped bacteria, dynamic MreB filaments control the synthesis of a new cell wall to maintain shape.
    By: James Wagstaff, Jan Löwe

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