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Other useful scripts - CUC3
https://wikis.ch.cam.ac.uk/cuc3/wiki/index.php/Other_useful_scripts6 Jan 2021: See the documentation for more information. Available for download from [1]. ... Goodbye. Available for download from [2]. -
Lapack compilation - CUC3
https://wikis.ch.cam.ac.uk/cuc3/wiki/index.php/Lapack_compilation6 Jan 2021: I installed it in /src/lib/lapack-3.1.1:. jss43@keiko:/src/lib> wget -O - http://www.netlib.org/lapack/lapack.tgz | tar xvzf - # Download and extract to -
SVN setup - CUC3
https://wikis.ch.cam.ac.uk/cuc3/wiki/index.php/SVN_setup6 Jan 2021: Finally, before you download the code, you need to set up the log file template. ... PROGRAM ------- SUMMARY OF CHANGES ------------------ SUBROUTINES AFFECTED -------------------- KEYWORDS AFFECTED ----------------- KNOWN ISSUES ------------. Save the -
Installing python modules - CUC3
https://wikis.ch.cam.ac.uk/cuc3/wiki/index.php/Installing_python_modules6 Jan 2021: The Python Cheeseshop has a great many useful packages. Make sure you download the tarball rather than the egg, as we will not be using the easy_install mechanism (which ... You can download it using bzr (which will be on the 10.3 image) or the tarballs -
Other useful scripts - CUC3
wikis.ch.cam.ac.uk/cuc3/wiki/index.php/Other_useful_scripts6 Jan 2021: See the documentation for more information. Available for download from [1]. ... Goodbye. Available for download from [2]. -
Fortran issues - CUC3
https://wikis.ch.cam.ac.uk/cuc3/wiki/index.php/Fortran_issues6 Jan 2021: I did:. jss43@keiko:/src/> wget -O - http://www.physik.fu-berlin.de/tburnus/gcc-trunk/gcc-4.2-x86_64.tar.gz | tar xvzf -. This downloads the gcc-4.2 -
CamCASP/Compilation - CUC3
https://wikis.ch.cam.ac.uk/cuc3/wiki/index.php/CamCASP/Compilation6 Jan 2021: It may be possible to get around this, but for now, I've found it easier to download my own copy of GCC 4.4. ... This is quite good. The library builds flawlessly (using gcc and gfortran) and even automatically downloads and builds LAPACK so you get it -
Useful Makefiles - CUC3
https://wikis.ch.cam.ac.uk/cuc3/wiki/index.php/Useful_Makefiles6 Jan 2021: Download mpiblacs.tgz and mpiblacs-patch03.tgz and extract. Extract the patch second, to apply it. ... Typing the following will create a cp2k directory and download the source code (if asked for a password just press enter):. -
SVN Page - CUC3
https://wikis.ch.cam.ac.uk/cuc3/wiki/index.php/SVN_Page6 Jan 2021: csw34 11:47, 23 September 2008 (BST). Help. svn help <command> is very useful, as is the O'Reilly book, which available free online (and for download) here:12:34, 31 ... A python script and a required xslt stylesheet (download from svnlogfeed.tar ) makes -
Visualising normal modes using VMD and OPTIM - CUC3
https://wikis.ch.cam.ac.uk/cuc3/wiki/index.php/Visualising_normal_modes_using_VMD_and_OPTIM6 Jan 2021: You require one of these files for each mode, and they are produced for you by a simple Fortran program, visnormodes.f90 that you can download here. -
Preparing an AMBER topology file for a protein plus ligand system -…
https://wikis.ch.cam.ac.uk/cuc3/wiki/index.php/Preparing_an_AMBER_topology_file_for_a_protein_plus_ligand_system6 Jan 2021: Molfacture, a tool in VMD. You will need the latest version of VMD to do this so either download and compile it yourself (which is pretty easy - honest!), or use my
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