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pm286 | petermr's blog | Page 178
https://blogs.ch.cam.ac.uk/pmr/author/pm286/page/178/17 Jan 2022: Peter Suber reports: Download milestone for BMC article 20:34 06/07/2007, Peter Suber, Open Access News Iain Hrynaszkiewicz, Open access article on consensus definition of acute renal failure has -
pm286 | petermr's blog | Page 149
https://blogs.ch.cam.ac.uk/pmr/author/pm286/page/149/17 Jan 2022: These explain his thinking of why a series of medium-sized chunks is a better way to support the download of CrystalEye than one … Continue reading. -
data | petermr's blog | Page 10
https://blogs.ch.cam.ac.uk/pmr/category/data/page/10/17 Jan 2022: Peter Suber reports: Download milestone for BMC article 20:34 06/07/2007, Peter Suber, Open Access News Iain Hrynaszkiewicz, Open access article on consensus definition of acute renal failure has -
CrystalEye: using the harvester | petermr's blog
https://blogs.ch.cam.ac.uk/pmr/2007/11/07/crystaleye-using-the-harvester/17 Jan 2022: Until then anyone who wishes to use CrystalEye a lot would do best to download the entries and build their own index. ... If one is going to be doing much work like this, it’s probably preferable to get a full download and iterate over the files. -
Open metabolomics data | petermr's blog
https://blogs.ch.cam.ac.uk/pmr/2008/05/04/open-metabolomics-data/17 Jan 2022: So, in principle, anyone could download our data and prove us wrong (or hopefully, concur with our findings), and we hope that our repositories (SetupX and BinBase) will become a helpful -
https://blogs.ch.cam.ac.uk/pmr/2007/04/29/repositories-or-lists-of-ope…
https://blogs.ch.cam.ac.uk/pmr/2007/04/29/repositories-or-lists-of-open-molecules/feed/index.xml17 Jan 2022: We ask that users who download significant portions of the database cite the DrugBank >paper in any resulting publications. ... We ask that users who download significant portions of the database cite the DrugBank >paper in any resulting publications.br / -
petermr's blog | A Scientist and the Web | Page 57
https://blogs.ch.cam.ac.uk/pmr/page/57/17 Jan 2022: These are Open – people can download the whole lot, annotate it, rework and repurpose it, etc. ... To see it download (rather large – I’m working on it) and view it full screen in Powerpoint (yes, you heard me) when it will advance every 15 seconds. -
save our spectra | petermr's blog
https://blogs.ch.cam.ac.uk/pmr/2007/08/12/save-our-spectra/17 Jan 2022: Last time I looked the metadata was proprietary and the data were closed (there was a limit of – I think – 100 downloads). -
petermr's blog | A Scientist and the Web | Page 7
https://blogs.ch.cam.ac.uk/pmr/page/7/17 Jan 2022: get the link. I have no idea what happens but I assume it says “do you want to download and install ReadCube and give it permission to read your filestore”. ... It is indeed DRM-armour. If you download the software, it immediately becomes apparent -
petermr's blog | A Scientist and the Web | Page 25
https://blogs.ch.cam.ac.uk/pmr/page/25/17 Jan 2022: The PDF and ODT available for download are best thought of as a fork of the living document to put the glossary in an accessible, nicely-formatted and tightly-edited form. ... Download the PDF and ODT here:. -
petermr's blog | A Scientist and the Web | Page 118
https://blogs.ch.cam.ac.uk/pmr/page/118/17 Jan 2022: RL:. Dear Mr. Schlafly:. I suggest you might want to read our paper itself, which is available for download at most university libraries and is also posted as publication #180 on ... Then we looked at the technology of scientific data. Download -
petermr's blog | A Scientist and the Web | Page 146
https://blogs.ch.cam.ac.uk/pmr/page/146/17 Jan 2022: In all these it’s commonplace to download the whole data – for example we state “Each MACiE entry in the database can be downloaded separately as a CML file. ... This is the approach we have adopted (Jim Downing wrote it specifically to help the -
petermr's blog | A Scientist and the Web | Page 199
https://blogs.ch.cam.ac.uk/pmr/page/199/17 Jan 2022: Yes, I can claim some minor formal credit for an invited talk, but probably not to a company!) This was videoed and has received 1727 downloads and 12 5-star ratings. ... It would be nice if you could automatically import your starred articles into -
petermr's blog | A Scientist and the Web | Page 189
https://blogs.ch.cam.ac.uk/pmr/page/189/17 Jan 2022: Now ChemZoo is a commercial company, the data are not open (at least not explicitly – can anyone download the whole data base and if so what license covers it) and the ... In contrast Pubchem is open – anyone – like us can download the whole data. -
Open Data – 2 | petermr's blog
https://blogs.ch.cam.ac.uk/pmr/2007/11/19/open-data-2/17 Jan 2022: In all these it’s commonplace to download the whole data – for example we state “Each MACiE entry in the database can be downloaded separately as a CML file. -
JailBreaking the PDF | petermr's blog
https://blogs.ch.cam.ac.uk/pmr/2013/05/21/jailbreaking-the-pdf/17 Jan 2022: Download PDFs from the open web. Turn them into semantic form. -
petermr's blog | A Scientist and the Web | Page 50
https://blogs.ch.cam.ac.uk/pmr/page/50/17 Jan 2022: Of course I can download and run my private instance if I wish). ... Anyone can download the software, or any of the content. There are no walled gardens. -
petermr's blog | A Scientist and the Web | Page 88
https://blogs.ch.cam.ac.uk/pmr/page/88/17 Jan 2022: Adobe’s DRM requires you to download your ebook to ebook reading software called Adobe Digital Editions. ... Because Tranche is part of the ProteomExchange consortium, however, other resources, such as PRIDE and Peptidome, have access to its data and -
petermr's blog | A Scientist and the Web | Page 114
https://blogs.ch.cam.ac.uk/pmr/page/114/17 Jan 2022: For those public studies people can download all the raw data and all the annotated and result data and even the underlying software. ... our experiments and download RAW and processed data and all needed software and that can only be topped by Open -
petermr's blog | A Scientist and the Web | Page 116
https://blogs.ch.cam.ac.uk/pmr/page/116/17 Jan 2022: What if the entire system provided simple webby APIs so that developers can upload as well as download stuff easily? ... zip up the components. download “web page” in proprietary form (such as mht). -
petermr's blog | A Scientist and the Web | Page 174
https://blogs.ch.cam.ac.uk/pmr/page/174/17 Jan 2022: Every day a spider visits the sites of publishers who expose crystallographic data, downloads it, validates it, etc. ... and …. You may print or download Content from the Site for your own personal, non-commercial use, provided that you keep intact all -
https://blogs.ch.cam.ac.uk/pmr/2008/04/08/have-any-closed-access-artic…
https://blogs.ch.cam.ac.uk/pmr/2008/04/08/have-any-closed-access-articles-appear-in-pmc/feed/index.xml17 Jan 2022: fulltext) - where a robot can go and be assured that it can download anything without getting letters from lawyers. ... I do - Wikipedia. p> I don’t know of a true OA repository (of fulltext) – where a robot can go and be assured that it can download -
petermr's blog | A Scientist and the Web | Page 31
https://blogs.ch.cam.ac.uk/pmr/page/31/17 Jan 2022: I can download it and feed it to #ami2 – our semantic program for extracting science from PDFs. ... I don’t seem to have many rights (my emphasis):. You may access, download, store, search and print hard copy of text. -
https://blogs.ch.cam.ac.uk/pmr/category/www2007/feed/index.xml
https://blogs.ch.cam.ac.uk/pmr/category/www2007/feed/index.xml17 Jan 2022: Instant “ON” – no downloads. Dataflow apps tuned to visual programming. -
petermr's blog | A Scientist and the Web | Page 48
https://blogs.ch.cam.ac.uk/pmr/page/48/17 Jan 2022: Wiley’s server-side robots which will shut off the University if we attempt to download publications automatically. ... We shall use a delay of 1 second between downloads and we shall not re-publish verbatim the papers we download. -
https://blogs.ch.cam.ac.uk/pmr/tag/lotf09/feed/index.xml
https://blogs.ch.cam.ac.uk/pmr/tag/lotf09/feed/index.xml17 Jan 2022: How can we help them to catch up? /p p Can’t make it to Oxford on 2 April, I’m afraid – prior engagement – but I’ll download the proceedings. -
petermr's blog | A Scientist and the Web | Page 184
https://blogs.ch.cam.ac.uk/pmr/page/184/17 Jan 2022: Instant “ON” – no downloads. Dataflow apps tuned to visual programming. -
Updated OpenVPN server | Blogs of the IT Team
https://blogs.ch.cam.ac.uk/cosblog/2019/06/12/updated-openvpn-server/17 Jan 2022: Anyone wanting to try out the new server can download updated VPN configuration files from our website. -
petermr's blog | A Scientist and the Web | Page 26
https://blogs.ch.cam.ac.uk/pmr/page/26/17 Jan 2022: User Rights. All articles published Open Access will be immediately and permanently free for everyone to read and download. ... Michael and his team now have to download the results, study them, and if they have more data add it to the system 🙂. -
petermr's blog | A Scientist and the Web | Page 138
https://blogs.ch.cam.ac.uk/pmr/page/138/17 Jan 2022: The SVN repository is the primary resource besides the downloads. For those who are familiar (use Tortoise for Windows) the natural way is to SVNUpdate from time to time. -
petermr's blog | A Scientist and the Web | Page 65
https://blogs.ch.cam.ac.uk/pmr/page/65/17 Jan 2022: Lets’ go to PLoS on May 27 and see the other article downloads. ... download” it and see why it’s popular. You might even read it (I did, briefly). -
Open Chemistry Data at NIST | petermr's blog
https://blogs.ch.cam.ac.uk/pmr/2009/04/24/open-chemistry-data-at-nist/17 Jan 2022: Download Url:. ... Also it would be useful if Steve or anyone else has any more download links to add! -
The British Library’s Secure Electronic Delivery | petermr's blog
https://blogs.ch.cam.ac.uk/pmr/2010/05/09/the-british-librarys-secure-electronic-delivery/17 Jan 2022: Just click on the link while connected to the Internet to download the document. ... We strongly recommend that you do this before you try to download a document delivered by secure electronic delivery. -
Webcast: the power of the eThesis | petermr's blog
https://blogs.ch.cam.ac.uk/pmr/2007/09/09/webcast-the-power-of-the-ethesis/17 Jan 2022: Googling murray-rust and caltech found the presentation on the caltech site, which offers the chance to download necessary media player stuff. ... But I will hope to download a local copy for Cambridge. -
https://blogs.ch.cam.ac.uk/pmr/2007/07/13/heather-shows-that-open-data…
https://blogs.ch.cam.ac.uk/pmr/2007/07/13/heather-shows-that-open-data-increases-citations/feed/index.xml17 Jan 2022: I know you haven t been cited yet, but perhaps PLoS lets you know how many people download your paper.… [.] p[…] Heather shows that Open Data increases CitationsSo well done Heather, ... I know you haven t been cited yet, but perhaps PLoS lets you -
petermr's blog | A Scientist and the Web | Page 159
https://blogs.ch.cam.ac.uk/pmr/page/159/17 Jan 2022: Nature have a voting system but I don’t know whether they release download info on Precedings. ... NMRShiftDB does this, and we have been able to download thousands of CML files, extract the structures and spectra (as peaklists) automatically. -
petermr's blog | A Scientist and the Web | Page 63
https://blogs.ch.cam.ac.uk/pmr/page/63/17 Jan 2022: I can for example download all BMC content whenever I wish , subject only to the courtesy of agreeing a robot-friendly protocol when I want. ... Can I systematically download all Green material from the 100 UK repositories? -
petermr's blog | A Scientist and the Web | Page 126
https://blogs.ch.cam.ac.uk/pmr/page/126/17 Jan 2022: this. AJW> If Jim can contact me by email and provide me with detailed instructions to download the entire file of structures ONLY and their associated URLs that would be excellent. ... So, in principle, anyone could download our data and prove us -
petermr's blog | A Scientist and the Web | Page 151
https://blogs.ch.cam.ac.uk/pmr/page/151/17 Jan 2022: I think this is true of Pubchem – anyone can download individual entries and re-use but it is required (and common courtesy) to ask before downloading the whole lot. ... remember when to download and what the size of chunk are. -
Do you read journals, or "use a database"? | petermr's…
https://blogs.ch.cam.ac.uk/pmr/2006/09/11/do-you-read-journals-or-use-a-database/17 Jan 2022: This appears to be a simultaneous download of many consecutive pages and could look like a systematic attempt to download the issue. ... The contract presumably says that the content belongs to the ACS and that any attempt to download it unreasonably is -
https://blogs.ch.cam.ac.uk/pmr/2013/05/28/jailbreaking-the-pdf-2-techn…
https://blogs.ch.cam.ac.uk/pmr/2013/05/28/jailbreaking-the-pdf-2-technical-aspects-glyph-processing/feed/index.xml17 Jan 2022: The figures referenced by the XML are actually retrievable (e.g. Fig 1 is http://www.biomedcentral.com/content/download/figures/1471-2180-11-174-1) but obviously only bitmaps. ... readable version -
https://blogs.ch.cam.ac.uk/pmr/category/data/feed/index.xml
https://blogs.ch.cam.ac.uk/pmr/category/data/feed/index.xml17 Jan 2022: data – petermr's blog /pmr A Scientist and the Web Sun, 06 Jan 2008 10:01:32 0000 en-US hourly 1 https://wordpress.org/?v=5.8.3 Open Data in Science /pmr/2008/01/06/open-data-in-science/ /pmr/2008/01/06/open-data-in-science/#comments pm286 Sun, 06 -
https://blogs.ch.cam.ac.uk/pmr/2009/03/10/approaches-to-compound-docum…
https://blogs.ch.cam.ac.uk/pmr/2009/03/10/approaches-to-compound-documents-ore-pdf-docx/feed/index.xml17 Jan 2022: edu:8080/m1/ For those public studies people can download all the raw data and all the annotated and result data and even the underlying software. ... our experiments and download RAW and processed data and all needed software and that can only be topped -
Suber-Harnad strongOA/weakOA borderline | petermr's blog
https://blogs.ch.cam.ac.uk/pmr/2008/05/04/suber-harnad-strongoaweakoa-borderline/17 Jan 2022: 2) The free access is one-click and non-gerrymandered: Instant download without having to do a song and dance for every page. ... This includes DRM, explicit logins and restriction of the number or type of downloads. -
https://blogs.ch.cam.ac.uk/pmr/2011/03/10/mendeley-api-binary-battle-i…
https://blogs.ch.cam.ac.uk/pmr/2011/03/10/mendeley-api-binary-battle-isitopendata/feed/index.xml17 Jan 2022: To answer you acid test: yes, you could download and mash up our data set in any way you see fit. -
PLoS One, Text-mining, Metrics and Bats | petermr's blog
https://blogs.ch.cam.ac.uk/pmr/2011/07/08/plos-one-text-mining-metrics-and-bats/17 Jan 2022: Lets’ go to PLoS on May 27 and see the other article downloads. ... download” it and see why it’s popular. You might even read it (I did, briefly). -
petermr's blog | A Scientist and the Web | Page 14
https://blogs.ch.cam.ac.uk/pmr/page/14/17 Jan 2022: The licence explicitly prohibits the use of robots, spiders, crawlers or other automated programs, or algorithms to download content from the website itself, which are the most common ways of performing ... So what can this spreadsheet be used for? we -
petermr's blog | A Scientist and the Web | Page 117
https://blogs.ch.cam.ac.uk/pmr/page/117/17 Jan 2022: It’s only hearsay but I understand that these can include “excessive downloads” or data-mining. -
Stevan Harnad on "open access" | petermr's blog
https://blogs.ch.cam.ac.uk/pmr/2007/06/12/stevan-harnad-on-open-access/17 Jan 2022: I asked “can my robots download and mine the content in your current open access repository of theses?” – No. ... Download and crunch away. This is all common sense, and all comes with the OA territory when the author makes his full-text freely -
Text-mining the NIH mandated papers | petermr's blog
https://blogs.ch.cam.ac.uk/pmr/2008/04/07/text-mining-the-nih-mandated-papers/17 Jan 2022: Additional points: Some correspondents suggest the only NIH/PMC barrier is robots.txt – a guide to how and when robots can download. ... Some correspondents suggest the only NIH/PMC barrier is robots.txt – a guide to how and when robots can download.
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