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  2. petermr's blog | A Scientist and the Web | Page 20

    https://blogs.ch.cam.ac.uk/pmr/page/20/
    17 Jan 2022: Now EPUBReader starts working: it downloads/opens the ePub file, uncompresses it and does some other processing. ... It only downloads things. G: So will it download my articles?
  3. What's so wonderful about citations? | petermr's blog

    https://blogs.ch.cam.ac.uk/pmr/2007/07/07/whats-so-wonderful-about-citations/
    17 Jan 2022: don’t count downloads would suggest that the download metric is genuine. ... The very fact that the metric-weenies don’t count downloads would suggest that the download metric is genuine.
  4. https://blogs.ch.cam.ac.uk/pmr/category/berlin5/feed/index.xml

    https://blogs.ch.cam.ac.uk/pmr/category/berlin5/feed/index.xml
    17 Jan 2022: Mandate DEPOSIT. Need author’s final version (as well as PDF)/li liusage: UoCalif 2 million downloads. ... Interoperable Respistory Statistics (IRS) will help. Monthly download, Daily downloads, types of referrer, etc.
  5. 17 Jan 2022: Anyone wanting to try out the new server can download updated VPN configuration files from our website.
  6. Frank Lee | Blogs of the IT Team

    https://blogs.ch.cam.ac.uk/cosblog/author/rl201/
    17 Jan 2022: The word “buffering” often appears when watching an online video – the display pauses for a bit while the next bunch of data downloads and then the cute kittens start moving again.
  7. Our manifesto: “The Right to Read is the Right to Mine”;…

    https://blogs.ch.cam.ac.uk/pmr/2012/09/16/our-manifesto-the-right-to-read-is-the-right-to-mine-universities-you-must-fight-for-open-content-mining-before-its-too-late/
    17 Jan 2022: Publishers should add clarifying language in  subscription agreements that content is available for information mining by download or by remote access.
  8. https://blogs.ch.cam.ac.uk/pmr/2009/03/29/should-theses-be-open/feed/i…

    https://blogs.ch.cam.ac.uk/pmr/2009/03/29/should-theses-be-open/feed/index.xml
    17 Jan 2022: microfilm' system - and the downloads of digitised theses far outstrip the previous supply figures. ... speak for themselves – in under 2 months EThOS has had requests to digitise more than a years worth of theses as measured by the previous
  9. petermr's blog | A Scientist and the Web | Page 82

    https://blogs.ch.cam.ac.uk/pmr/page/82/
    17 Jan 2022: So far it:. Downloads patents from weekly indexes. Unzips them. Converts the images to chemistry. ... Our current software downloads the index, extracts all patents, and selects those which are classified as chemistry.
  10. 17 Jan 2022: The word “buffering” often appears when watching an online video – the display pauses for a bit while the next bunch of data downloads and then the cute kittens start moving again.
  11. petermr's blog | A Scientist and the Web | Page 181

    https://blogs.ch.cam.ac.uk/pmr/page/181/
    17 Jan 2022: I asked “can my robots download and mine the content in your current open access repository of theses?” – No. ... It offers two sorts of download: “(i) PDF – and (ii) Other (Latex) – Access restricted to members of ECS [i.e.
  12. What makes an Internet meme? Chemical MIME and CML… “We must just…

    https://blogs.ch.cam.ac.uk/pmr/2010/10/27/what-makes-an-internet-meme-chemical-mime-and-cml-we-must-just-kbo/
    17 Jan 2022: 200,000 structures in Crystaleye. 200,000 downloads of Chem4Word. There’s a lot more “buggering on” required.
  13. petermr's blog | A Scientist and the Web | Page 66

    https://blogs.ch.cam.ac.uk/pmr/page/66/
    17 Jan 2022: OuterCurve/codeplex: (11K downloads in last month). OPSIN, a name2structure converter (Daniel Lowe et al.);. ... Create a directory on your system and download OSCAR4 (Bitbucket even tells you how:.
  14. petermr's blog | A Scientist and the Web | Page 136

    https://blogs.ch.cam.ac.uk/pmr/page/136/
    17 Jan 2022: The download page has clear instructions about how to install the plugin. ... Nico]. I have submitted the audiofile containing the XML anniversary interview with Peter to our DSpace repository and you can download it from here:.
  15. petermr's blog | A Scientist and the Web | Page 33

    https://blogs.ch.cam.ac.uk/pmr/page/33/
    17 Jan 2022: S: I will ask PMR to mail her. A: If you give me a list I will download the articles and iterate over them. ... Happy ending? Who knows. A garden is walled if you cannot fork, or download the whole contents.
  16. https://blogs.ch.cam.ac.uk/pmr/2011/03/08/scholarly-html-hackfest/feed…

    https://blogs.ch.cam.ac.uk/pmr/2011/03/08/scholarly-html-hackfest/feed/index.xml
    17 Jan 2022: I download bibliographies from various places, using emacs to pick them apart, and store them as bibtex format.
  17. We launch The Content Mine In Vienna, Interviews, Talks and our first …

    https://blogs.ch.cam.ac.uk/pmr/2014/06/13/we-launch-the-content-mine-in-vienna-interviews-talks-and-our-first-public-workshop/
    17 Jan 2022: These techniques include how to download multiple files, extract concepts and facts from the literature and figures, using Natural Language Processing and Computer Vision.
  18. The scandal of publisher-forbidden textmining: The vision denied |…

    https://blogs.ch.cam.ac.uk/pmr/2011/11/25/the-scandal-of-publisher-forbidden-textmining-the-vision-denied/
    17 Jan 2022: As I did my PhD in Denmark (DTU), I naively wrote a robot to download the issues of a well known chemical data journal.
  19. petermr's blog | A Scientist and the Web | Page 61

    https://blogs.ch.cam.ac.uk/pmr/page/61/
    17 Jan 2022: By open data in crystallography we mean that it is freely available on the public internet permitting any user to download, copy, analyse, re-process, pass them to software or use ... How? By writing a repository crawler?). There are no download
  20. petermr's blog | A Scientist and the Web | Page 187

    https://blogs.ch.cam.ac.uk/pmr/page/187/
    17 Jan 2022: Perhaps Dietrich can help? On a more technical note. It is actually not easy to download all the molecules from Molecules. ... If Molecules provide:. an index of the molecules. an agreement that we can download every paper and scrape chemistry from it.
  21. https://blogs.ch.cam.ac.uk/pmr/2009/04/24/open-chemistry-data-at-nist/…

    https://blogs.ch.cam.ac.uk/pmr/2009/04/24/open-chemistry-data-at-nist/feed/index.xml
    17 Jan 2022: Its not entirely clear to me what the 'All Rights Reserved' notice applies to.) Also it would be useful if Steve or anyone else has any more download links to add! ... Its not entirely clear to me what the ‘All Rights Reserved’ notice applies to.)br /
  22. https://blogs.ch.cam.ac.uk/pmr/category/etd2007/feed/index.xml

    https://blogs.ch.cam.ac.uk/pmr/category/etd2007/feed/index.xml
    17 Jan 2022: I asked “can my robots download and mine the content in your current open access repository of theses?” – No. ... Download, print, save and crunch (just as you could have done if you had keyed in the text from reading the pages of a paper book)!
  23. petermr's blog | A Scientist and the Web | Page 47

    https://blogs.ch.cam.ac.uk/pmr/page/47/
    17 Jan 2022: We discussed it amicably – explanation made it clear and the download behaviour was modified for both sides to be happy with continuation. ... To download and analyze, using machines, papers from Wiley journals to which we have subscriptions (we use web
  24. https://blogs.ch.cam.ac.uk/pmr/2007/10/15/what-does-open-access-mean/f…

    https://blogs.ch.cam.ac.uk/pmr/2007/10/15/what-does-open-access-mean/feed/index.xml
    17 Jan 2022: Stevan comments: Individual re-use capabilities: If a document’s full-text is freely accessible online (OA), that means any individual can (1) access it, (2) read it, (3) download it,
  25. OAI-ORE | petermr's blog

    https://blogs.ch.cam.ac.uk/pmr/2007/05/01/oai-ore/
    17 Jan 2022: The presentation was recorded on video and is available for both streaming and download at:. <>.
  26. https://blogs.ch.cam.ac.uk/pmr/2006/09/11/do-you-read-journals-or-use-…

    https://blogs.ch.cam.ac.uk/pmr/2006/09/11/do-you-read-journals-or-use-a-database/feed/index.xml
    17 Jan 2022: The contract presumably says that the content belongs to the ACS and that any attempt to download it unreasonably is forbidden. ... This appears to be a simultaneous download of many consecutive pages and could look like a systematic attempt to download
  27. petermr's blog | A Scientist and the Web | Page 99

    https://blogs.ch.cam.ac.uk/pmr/page/99/
    17 Jan 2022: The PDF required me to download a closed-source proprietary plugin from Adobe. ... And absolutely no expressed appreciation of the fact that someone might wish to download 10,000 theses at once.
  28. Capturing SPECTRa | petermr's blog

    https://blogs.ch.cam.ac.uk/pmr/2007/12/09/capturing-spectra/
    17 Jan 2022: I predict that he will get many downloads and hopefully not a few citations. ... In any case people can download the data and reuse if it is labeled Open Data on submission (our definition).
  29. petermr's blog | A Scientist and the Web | Page 156

    https://blogs.ch.cam.ac.uk/pmr/page/156/
    17 Jan 2022: Installation. After installing JRuby, simply download the OPSIN jarfile and copy it to your JRuby. ... Note that even if you upload data and metadata you are not allowed to download it (there is a limit of 100 structures).
  30. https://blogs.ch.cam.ac.uk/pmr/2013/08/12/elsevier-charges-to-read-ope…

    https://blogs.ch.cam.ac.uk/pmr/2013/08/12/elsevier-charges-to-read-openaccess-articles/feed/index.xml
    17 Jan 2022: On Sunday, Murray-Rust revisited the topic in“Elsevier are still charging THOUSANDS of pounds […] p[…] charging to download open access articlesand last August Dr. ... p=5261#comment-4111 […] charging to download open access articles and last
  31. 17 Jan 2022: The change you need to make is to download and install an updated config file from.
  32. petermr's blog | A Scientist and the Web | Page 13

    https://blogs.ch.cam.ac.uk/pmr/page/13/
    17 Jan 2022: I’ll note that the affected were nt trying to download the whole of ACS and sell it , but were indulging in natural and acceptable curiosity. ... What else can we download? After all this is Open Access, isn’t it?
  33. petermr's blog | A Scientist and the Web | Page 161

    https://blogs.ch.cam.ac.uk/pmr/page/161/
    17 Jan 2022: Interoperable Respistory Statistics (IRS) will help. Monthly download, Daily downloads, types of referrer, etc. ... Citation download of the article. Migration to the Struts 2 web application framework.
  34. Licenses?! | petermr's blog

    https://blogs.ch.cam.ac.uk/pmr/2006/12/06/licenses/
    17 Jan 2022: permission of the publisher.” Asking for written permission before downloading a web page (which you had to download before you could read the notice, was a bit, well, duhhh!
  35. petermr's blog | A Scientist and the Web | Page 128

    https://blogs.ch.cam.ac.uk/pmr/page/128/
    17 Jan 2022: OA means that any user, anywhere, who has access to the Internet, may link, read, download, store, print-off, use, and data-mine the digital content of that article [PMR: without ... I believe is possible for anyone to download a complete journal,
  36. petermr's blog | A Scientist and the Web | Page 129

    https://blogs.ch.cam.ac.uk/pmr/page/129/
    17 Jan 2022: IUCr’s Acta Crystallographica E is now Open Source. In principle we could download all the papers and mount them on our site. ... We also mount data under various data and code licences. Anyone can download it without our permission.
  37. PDFs | petermr's blog

    https://blogs.ch.cam.ac.uk/pmr/2009/06/19/pdfs/
    17 Jan 2022: The PDF required me to download a closed-source proprietary plugin from Adobe.
  38. https://blogs.ch.cam.ac.uk/pmr/2007/10/25/open-notebook-nmr-another-ou…

    https://blogs.ch.cam.ac.uk/pmr/2007/10/25/open-notebook-nmr-another-outlier/feed/index.xml
    17 Jan 2022: 01_09:09:12_0970 inconsistent (3) Methylgroups in terminal olefinic doublebonds (like geraniol) (cis around 18 / trans around 25ppm) Download from May'07 and CSEARCH check applied: 57(!) entries wrong ... nofollow ugc"/a andbr / a href="" rel="nofollow
  39. petermr's blog | A Scientist and the Web | Page 10

    https://blogs.ch.cam.ac.uk/pmr/page/10/
    17 Jan 2022: 2) We would strongly advise that you download the latest version of Acrobat Reader, which is available free at:. ... APIs or other download mechanisms when the website in question holds a lot of content.
  40. https://blogs.ch.cam.ac.uk/pmr/tag/data-curation-hamburger/feed/index.…

    https://blogs.ch.cam.ac.uk/pmr/tag/data-curation-hamburger/feed/index.xml
    17 Jan 2022: What I would really need is the digital raw data…preferably in some open format, which I can download, look at and work on.
  41. technical | Blogs of the IT Team

    https://blogs.ch.cam.ac.uk/cosblog/category/technical/
    17 Jan 2022: The word “buffering” often appears when watching an online video – the display pauses for a bit while the next bunch of data downloads and then the cute kittens start moving again.
  42. https://blogs.ch.cam.ac.uk/pmr/2007/06/10/open-access-is-not-good-enou…

    https://blogs.ch.cam.ac.uk/pmr/2007/06/10/open-access-is-not-good-enough/feed/index.xml
    17 Jan 2022: Download, print, save and crunch (just as you could have done if you had keyed in the text from reading the pages of a paper book)! ... Download and crunch away. This is all common sense, and all comes with the OA territory when the author makes his
  43. XML is Ten! | petermr's blog

    https://blogs.ch.cam.ac.uk/pmr/2008/02/05/xml-is-ten/
    17 Jan 2022: Nico]. I have submitted the audiofile containing the XML anniversary interview with Peter to our DSpace repository and you can download it from here:.
  44. petermr's blog | A Scientist and the Web | Page 154

    https://blogs.ch.cam.ac.uk/pmr/page/154/
    17 Jan 2022: Says:. Peter, all that is needed to perform the calculations for comparison using the ACD/Labs NMR predictors is a download of the exact dataset Christoph provided to you (we have ... I now download them, aggregate them and repurpose them. What is the
  45. https://blogs.ch.cam.ac.uk/pmr/2006/11/08/pubchem-and-thomson-two-chee…

    https://blogs.ch.cam.ac.uk/pmr/2006/11/08/pubchem-and-thomson-two-cheers/feed/index.xml
    17 Jan 2022: But try getting biological testing data from CAS or even bulk downloads of chemical structures.
  46. ContentMine at WOSP2014: Text and Data Mining: III What…

    https://blogs.ch.cam.ac.uk/pmr/2014/09/16/contentmine-at-wosp2014-text-and-data-mining-iii-what-elseviers-chris-shillum-thinks-we-can-do-responsible-mining/
    17 Jan 2022: For the record I sometimes download manually in sequence as many Elsevier papers as I can to (a) check the licence or (b) to see whether the figures contain chemistry, or ... If I download a complete Closed Access paper from Elsevier and post it on a
  47. Open Access and Fuzzy Access | petermr's blog

    https://blogs.ch.cam.ac.uk/pmr/2007/05/05/open-access-and-fuzzy-access/
    17 Jan 2022: Perhaps Dietrich can help? On a more technical note. It is actually not easy to download all the molecules from Molecules. ... If Molecules provide:. an index of the molecules. an agreement that we can download every paper and scrape chemistry from it.
  48. petermr's blog | A Scientist and the Web | Page 157

    https://blogs.ch.cam.ac.uk/pmr/page/157/
    17 Jan 2022: then it will make for a good study.Will it be possible to download the entire dataset with predicted list of shifts in a standard consumable format such as SDF? ... However the download is of higher quality. Paul, if you want the raw video (15GB) contact
  49. Buffering… | Blogs of the IT Team

    https://blogs.ch.cam.ac.uk/cosblog/2013/02/18/buffering/
    17 Jan 2022: The word “buffering” often appears when watching an online video – the display pauses for a bit while the next bunch of data downloads and then the cute kittens start moving again.
  50. petermr's blog | A Scientist and the Web | Page 176

    https://blogs.ch.cam.ac.uk/pmr/page/176/
    17 Jan 2022: However, we think that it is worth the investment. The interest is hard to quantify, but from download statistics and Google rankings, we can see that it really pays off!. ... This allows people to skip large downloads if they are on a slow
  51. petermr's blog | A Scientist and the Web | Page 192

    https://blogs.ch.cam.ac.uk/pmr/page/192/
    17 Jan 2022: The add-in downloads the Creative Commons license you designate from the Creative Commons Web site and inserts it directly into your creative work. ... You cannot patent data. So let’s encourage everyone to download this plugin.

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