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6 May 2024: university of cambridge. practical one: building molecules. The Silicon Graphics Teaching Laboratory. has been replaced by the. Chemical Information Laboratory. and this information is for historical interest only. Practical One: Building Molecules.

6 May 2024: university of cambridge. index of canonical SMILES. Goodman Group, 2005-2024; privacy; last updated May 6, 2024.

6 May 2024: university of cambridge. cyclohexane (twist boat). SMILES. C1CCCCC1. Canonical SMILES. C1CCCCC1. InChI. InChI=1/C6H12/c1-2-4-6-5-3-1/h1-6H2.

6 May 2024: university of cambridge. arachidonic acid. SMILES. CCCCC/C=CC/C=CC/C=CC/C=CCCCC(O)=O. Canonical SMILES. CCCCCC=CCC=CCC=CCC=CCCCC(=O)O. InChI.

6 May 2024: university of cambridge. examples. Examples. A simple FLIP command file. INFILE OUTFILE COMM This file will flip atom number 1, keeping 2 and 3 COMM unchanged and swapping 4 and 5. FLIP 1 2 3 4 5. A simple CHNG command file. INFILE OUTFILE COMM This

6 May 2024: university of cambridge. c60. SMILES. C12=C(C3=C4C5=C67)C8=C9C%10=C1C(C%11=C%12%13)=C%14C%10=C(C%15=C%16C%17=C%18C%19=C%20C%21=C%18C%22=C%16C%23=C%24C%15=C%14C%13=C%24C%25=C%26C%23=C%22%27)C%17=C9C%19=C8C4=C%20C5=C%28C%21=C%27C%29=C%26C%30=C%25C%12=C

6 May 2024: university of cambridge. arabinose (alpha pyranose). Alternate names arabinose. α-arabinose. SMILES. O[C@H]1[C@@H](O)[C@H](O)[C@H](O)CO1. Canonical SMILES. InChI. InChI=1/C5H10O5/c6-2-1-10-5(9)4(8)3(2)7/h2-9H,1H2/t2-,3-,4+,5-/m1/s1.

6 May 2024: university of cambridge. dracorubin. SMILES. O=C1C(C)=C2C(C(O3)=C1)=C(C(C(O[C@H]([C@@]4=CC=CC=C4)CC5)=C5C(OC)=C6)=C6O2)C=C3C7=CC=CC=C7. Canonical SMILES. COc1cc2oc3c(C)c(=O)cc4oc(cc(c2c5OC(CCc15)c6ccccc6)c43)c7ccccc7. InChI. InChI=1/C32H24O5/c1-18-23

6 May 2024: university of cambridge. arabinose (beta pyranose). Alternate names arabinose. β-arabinose. SMILES. O[C@@H]1[C@@H](O)[C@H](O)[C@H](O)CO1. Canonical SMILES. InChI. InChI=1/C5H10O5/c6-2-1-10-5(9)4(8)3(2)7/h2-9H,1H2/t2-,3-,4+,5+/m1/s1.

6 May 2024: university of cambridge. arabinose (beta furanose). Alternate names arabinose. β-arabinose. SMILES. O[C@H]1[C@H](O)[C@@H](CO)O[C@@H]1O. Canonical SMILES. InChI. InChI=1/C5H10O5/c6-1-2-3(7)4(8)5(9)10-2/h2-9H,1H2/t2-,3-,4+,5+/m1/s1.

6 May 2024: university of cambridge. arabinose (alpha furanose). Alternate names arabinose. α-arabinose. SMILES. O[C@H]1[C@H](O)[C@@H](CO)O[C@H]1O. Canonical SMILES. InChI. InChI=1/C5H10O5/c6-1-2-3(7)4(8)5(9)10-2/h2-9H,1H2/t2-,3-,4+,5-/m1/s1.

6 May 2024: university of cambridge. environment and agriculture. Environment and Agriculture. March 2013). was Chemistry in Britain). ChemNetBase On line chemical information. formerly Proceedings of the Indian Academy of Sciences (Chemical Sciences)). June

6 May 2024: university of cambridge. taxol. SMILES. CC1=C([C@@H](OC(C)=O)C2=O)C(C)(C)[C@@]([C@@H](OC(C3=CC=CC=C3)=O)[C@@]4([H])[C@@]2(C)[C@@H](O)C[C@@H]5[C@@]4(OC(C)=O)CO5)(O)C[C@@H]1OC([C@H](O)[C@@H](NC(C6=CC=CC=C6)=O)C7=CC=CC=C7)=O. Canonical SMILES.

6 May 2024: university of cambridge. macroModel atom types. The Silicon Graphics Teaching Laboratory. has been replaced by the. Chemi cal Information Laboratory. and this information is for historical interest only. MacroModel Atom Types. MacroModel - Atom and

6 May 2024: university of cambridge. CHNG. CHNG. CHNG a b c d e. CHNG. must be followed by five integers. The first two are atom numbers. The first atom is the point of attachment of the sidechain, and will remain unchanged. The second atom will be changed into

6 May 2024: university of cambridge. practical five: viewing orbitals and normal modes. The Silicon Graphics Teaching Laboratory. has been replaced by the. Chemical Information Laboratory. and this information is for historical interest only. Practical Five:

6 May 2024: university of cambridge. Genetic Code. Genetic Code. AAA Lys ACA Thr AGA Arg ATA Ile AAC Asn ACC Thr AGC Ser ATC Ile AAG Lys ACG Thr AGG Arg ATG Met/start AAT Asn ACT Thr AGT Ser ATT Ile CAA Gln CCA Pro CGA Arg CTA Leu CAC His CCC Pro CGC Arg CTC

6 May 2024: university of cambridge. Alanine. Sorry - your browser cannot display Java. Use the mouse to rotate the molecules. Hold down the 'shift' key and move the mouse to move them. Hold down the 'control' key and move the mouse to scale them. Goodman Group,

6 May 2024: university of cambridge. Argnine. Sorry - your browser cannot display Java. Use the mouse to rotate the molecules. Hold down the 'shift' key and move the mouse to move them. Hold down the 'control' key and move the mouse to scale them. Goodman Group,

6 May 2024: university of cambridge. Asparagine. Sorry - your browser cannot display Java. Use the mouse to rotate the molecules. Hold down the 'shift' key and move the mouse to move them. Hold down the 'control' key and move the mouse to scale them. Goodman

6 May 2024: university of cambridge. Glutamine. Sorry - your browser cannot display Java. Use the mouse to rotate the molecules. Hold down the 'shift' key and move the mouse to move them. Hold down the 'control' key and move the mouse to scale them. Goodman

6 May 2024: university of cambridge. Histidine. Sorry - your browser cannot display Java. Use the mouse to rotate the molecules. Hold down the 'shift' key and move the mouse to move them. Hold down the 'control' key and move the mouse to scale them. Goodman

6 May 2024: university of cambridge. Isoleucine. Sorry - your browser cannot display Java. Use the mouse to rotate the molecules. Hold down the 'shift' key and move the mouse to move them. Hold down the 'control' key and move the mouse to scale them. Goodman

6 May 2024: university of cambridge. Leucine. Sorry - your browser cannot display Java. Use the mouse to rotate the molecules. Hold down the 'shift' key and move the mouse to move them. Hold down the 'control' key and move the mouse to scale them. Goodman Group,

6 May 2024: university of cambridge. Lysine. Sorry - your browser cannot display Java. Use the mouse to rotate the molecules. Hold down the 'shift' key and move the mouse to move them. Hold down the 'control' key and move the mouse to scale them. Goodman Group,

6 May 2024: university of cambridge. Methionine. Sorry - your browser cannot display Java. Use the mouse to rotate the molecules. Hold down the 'shift' key and move the mouse to move them. Hold down the 'control' key and move the mouse to scale them. Goodman

6 May 2024: university of cambridge. Phenylalanine. Sorry - your browser cannot display Java. Use the mouse to rotate the molecules. Hold down the 'shift' key and move the mouse to move them. Hold down the 'control' key and move the mouse to scale them. Goodman

6 May 2024: university of cambridge. Proline. Sorry - your browser cannot display Java. Use the mouse to rotate the molecules. Hold down the 'shift' key and move the mouse to move them. Hold down the 'control' key and move the mouse to scale them. Goodman Group,

6 May 2024: university of cambridge. Serine. Sorry - your browser cannot display Java. Use the mouse to rotate the molecules. Hold down the 'shift' key and move the mouse to move them. Hold down the 'control' key and move the mouse to scale them. Goodman Group,

6 May 2024: university of cambridge. Threonine. Sorry - your browser cannot display Java. Use the mouse to rotate the molecules. Hold down the 'shift' key and move the mouse to move them. Hold down the 'control' key and move the mouse to scale them. Goodman

6 May 2024: university of cambridge. Tryptophan. Sorry - your browser cannot display Java. Use the mouse to rotate the molecules. Hold down the 'shift' key and move the mouse to move them. Hold down the 'control' key and move the mouse to scale them. Goodman

6 May 2024: university of cambridge. Tyrosine. Sorry - your browser cannot display Java. Use the mouse to rotate the molecules. Hold down the 'shift' key and move the mouse to move them. Hold down the 'control' key and move the mouse to scale them. Goodman Group

6 May 2024: university of cambridge. Valine. Sorry - your browser cannot display Java. Use the mouse to rotate the molecules. Hold down the 'shift' key and move the mouse to move them. Hold down the 'control' key and move the mouse to scale them. Goodman Group,

6 May 2024: university of cambridge. Cysteine. Cysteine. Sorry - your browser cannot display Java. Use the mouse to rotate the molecules. Hold down the 'shift' key and move the mouse to move them. Hold down the 'control' key and move the mouse to scale them.

6 May 2024: university of cambridge. R metolachlor. Alternate names aS, 5R metolachlor. Notes Metolachlor is a pesticide which has a chiral centre and also shows axial chirality. The latter does no appear to have a big effect on its activity, but the S form is

6 May 2024: university of cambridge. Aspartic Acid. Sorry - your browser cannot display Java. Use the mouse to rotate the molecules. Hold down the 'shift' key and move the mouse to move them. Hold down the 'control' key and move the mouse to scale them. Goodman

6 May 2024: university of cambridge. Glutamic Acid. Sorry - your browser cannot display Java. Use the mouse to rotate the molecules. Hold down the 'shift' key and move the mouse to move them. Hold down the 'control' key and move the mouse to scale them. Goodman

6 May 2024: university of cambridge. Glycine. Gly. G. Glycine is achiral. Sorry - your browser cannot display Java. Use the mouse to rotate the molecules. Hold down the 'shift' key and move the mouse to move them. Hold down the 'control' key and move the mouse

6 May 2024: university of cambridge. Guanine. Guanine is one of the four bases which form pairs to make up the rungs of the DNA helix. Guanine (G) forms a pair with a base called Cytosine (C). CG. More information. Guanine also plays a role in biochemical

6 May 2024: university of cambridge. abietic acid. SMILES. CC(C)C1=CC2=CC[C@@]3([H])[C@](C)(C(O)=O)CCC[C@]3(C)[C@@]2([H])CC1. Canonical SMILES. CC(C)C1=CC2=CCC3C(C)(CCCC3(C)C2CC1)C(=O)O. InChI.

6 May 2024: university of cambridge. cavicularin. Notes This molecule is chiral. The absolute configuration is not known. The three-dimensional picture, above, may show the natural product or may be its enantiomer. The InChI (version 1) naming system cannot

6 May 2024: university of cambridge. RBx11160. Literature. Spiro and Dispiro-1,2,4-trioxolanes as Antimalarial Peroxides: Charting a Workable Structure-Activity Relationship Using Simple Prototypes. Y. Dong, J. Chollet, H. Matile, S. A. Charman, F. C. K. Chiu,

6 May 2024: university of cambridge. 9,10 dimethoxy[7]helicene. Notes. Literature. Efficient Phenanthrene, Helicene, and Azahelicene Syntheses. D. C. Harrowven, I. L. Guy and L. Nanson Angew. Chem. Int. Ed. 2006, 45, 2242-2245. SMILES.

6 May 2024: university of cambridge. glabrescol. Literature. The stereochemistry of glabrescol. B. R. Bellenie and J. M. Goodman Tetrahedron Letters 2001, 42, 7477-7479. DOI: 10.1016/S0040-4039(01)01551-9. SMILES. CC(C)(O)[C@@](O1)([H])CC[C@]1(C)[C@@](O2)([H])CC

6 May 2024: university of cambridge. c70. SMILES.

6 May 2024: university of cambridge. eadfrith. The Silicon Graphics Teaching Laboratory. has been replaced by the. Chemi cal Information Laboratory. and this information is for historical interest only. Eadfrith. If you want to look at a molecule quickly,

6 May 2024: university of cambridge. macroModel. The Silicon Graphics Teaching Laboratory. has been replaced by the. Chemi cal Information Laboratory. and this information is for historical interest only. MacroModel Notes. How to start MacroModel / How to stop

6 May 2024: university of cambridge. computational chemistry journals. Computational. March 2013). Chemicke Zvesti; published under the auspices of the Slovak Academy of Sciences, the Slovak Chemical Society and the Faculty of Chemistry, Tomas Bata University,

6 May 2024: university of cambridge. Crambin. Sorry - your browser cannot display Java. Use the mouse to rotate the molecules. Hold down the 'shift' key and move the mouse to move them. Hold down the 'control' key and move the mouse to scale them. Goodman Group,

6 May 2024: university of cambridge. platensimycin. Literature. Platensimycin is a selective FabF inhibitor with potent antibiotic properties. J. Wang, S. M. Soisson, K. Young, W. Shoop, S. Kodali, A. Galgoci, R. Painter, G. Parthasarathy, Y. S. Tang, R.