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  2. cambridge crystallographic database

    https://www-jmg.ch.cam.ac.uk/cil/SGTL/CCDC.html
    18 Jul 2024: university of cambridge. cambridge crystallographic database. The Silicon Graphics Teaching Laboratory. has been replaced by the. Chemi cal Information Laboratory. and this information is for historical interest only. Brief Introduction to the
  3. Boiling Points

    https://www-jmg.ch.cam.ac.uk/tools/magnus/boil.html
    18 Jul 2024: university of cambridge. Boiling Points. The variation of boiling point with pressure. Sorry, your browser does not support Java. Trouton's rule ( F. Trouton. Nature 1883, 27, 292.) states that the entropy of vaporisation has almost the same value
  4. acca - version 0.931

    https://www-jmg.ch.cam.ac.uk/cil/SGTL/accadoc/
    18 Jul 2024: university of cambridge. acca - version 0.931. Acca. Version 0.931. Acca is a program which assists in conformation searching. It takes an input file of structures in the MacroModel format, and produces an output file of these structures transformed
  5. Rotavap Simulator

    https://www-jmg.ch.cam.ac.uk/tools/magnus/rotavap.html
    18 Jul 2024: university of cambridge. Rotavap Simulator. Rotavap Simulator. Sorry, your browser does not support Java. To use the applet, simply fill in all the boxes and press return or click the calculate button. To change between binary and ternary mixtures,
  6. Thiourea catalysis

    https://www-jmg.ch.cam.ac.uk/publications/b817283h.html
    18 Jul 2024: university of cambridge. Thiourea catalysis. What is the mechanism of amine conjugate additions to pyrazole crotonate catalyzed by thiourea catalysts? L. Simon and J. M. Goodman, Org. Biomol. Chem. 2009, 7, 483-487. Related work on proton-transfer
  7. glycine

    https://www-jmg.ch.cam.ac.uk/data/molecules/amino/gly.html
    18 Jul 2024: university of cambridge. glycine. Glycine. Gly. G. Glycine is achiral. SMILES. NCC(O)=O. Canonical SMILES NCC(=O)O. InChI. InChI=1/C2H5NO2/c3-1-2(4)5/h1,3H2,(H,4,5).
  8. Calculation of CP3

    https://www-jmg.ch.cam.ac.uk/tools/nmr/CP3.html
    18 Jul 2024: university of cambridge. Assignment of stereochemistry and structure using NMR and CP3. Assigning the Stereochemistry of Pairs of Diastereoisomers Using GIAO NMR Shift Calculation. S. G. Smith and J. M. Goodman J. Org. Chem. 2009, 74, 4597-4607.
  9. serine

    https://www-jmg.ch.cam.ac.uk/data/molecules/amino/ser.html
    18 Jul 2024: university of cambridge. serine. Serine. Ser. S. SMILES. OC[C@](C(O)=O)([H])N. Canonical SMILES NC(CO)C(=O)O. InChI. InChI=1/C3H7NO3/c4-2(1-5)3(6)7/h2,5H,1,4H2,(H,6,7)/t2-/m0/s1.
  10. cysteine

    https://www-jmg.ch.cam.ac.uk/data/molecules/amino/cys.html
    18 Jul 2024: university of cambridge. cysteine. Cysteine. Cys. C. SMILES. N[C@@H](CS)C(O)=O. Canonical SMILES NC(CS)C(=O)O. InChI. InChI=1/C3H7NO2S/c4-2(1-7)3(5)6/h2,7H,1,4H2,(H,5,6)/t2-/m0/s1. AuxInfo=1/1/N:3,2,5,1,6,7,4/E:(5,6)/it:im/rA:7nNCCSCOO/rB:s1;P2;s3;s2
  11. valine

    https://www-jmg.ch.cam.ac.uk/data/molecules/amino/val.html
    18 Jul 2024: university of cambridge. valine. Valine. Val. V. SMILES. N[C@@](C(O)=O)([H])C(C)C. Canonical SMILES CC(C)C(N)C(=O)O. InChI. InChI=1/C5H11NO2/c1-3(2)4(6)5(7)8/h3-4H,6H2,1-2H3,(H,7,8)/t4-/m0/s1.
  12. leucine

    https://www-jmg.ch.cam.ac.uk/data/molecules/amino/leu.html
    18 Jul 2024: university of cambridge. leucine. Leucine. Leu. L. SMILES. N[C@](CC(C)C)([H])C(O)=O. Canonical SMILES CC(C)CC(N)C(=O)O. InChI. InChI=1/C6H13NO2/c1-4(2)3-5(7)6(8)9/h4-5H,3,7H2,1-2H3,(H,8,9)/t5-/m0/s1.
  13. methionine

    https://www-jmg.ch.cam.ac.uk/data/molecules/amino/met.html
    18 Jul 2024: university of cambridge. methionine. Methionine. Met. M. SMILES. N[C@](CCSC)([H])C(O)=O. Canonical SMILES CSCCC(N)C(=O)O. InChI. InChI=1/C5H11NO2S/c1-9-3-2-4(6)5(7)8/h4H,2-3,6H2,1H3,(H,7,8)/t4-/m0/s1. AuxInfo=1/1/N:7,3,5,2,8,1,9,10,6/E:(7,8)/it:im/rA
  14. asparagine

    https://www-jmg.ch.cam.ac.uk/data/molecules/amino/asn.html
    18 Jul 2024: university of cambridge. asparagine. Asparagine. Asn. A. SMILES. N[C@@H](CC(N)=O)C(O)=O. Canonical SMILES NC(CC(=O)N)C(=O)O. InChI. InChI=1/C4H8N2O3/c5-2(4(8)9)1-3(6)7/h2H,1,5H2,(H2,6,7)(H,8,9)/t2-/m0/s1. AuxInfo=1/1/N:3,2,7,4,1,9,8,5,6/E:(8,9)/it:im
  15. glutamine

    https://www-jmg.ch.cam.ac.uk/data/molecules/amino/gln.html
    18 Jul 2024: university of cambridge. glutamine. Glutamine. Gln. Q. SMILES. N[C@H](C(O)=O)CCC(N)=O. Canonical SMILES NC(CCC(=O)N)C(=O)O. InChI. InChI=1/C5H10N2O3/c6-3(5(9)10)1-2-4(7)8/h3H,1-2,6H2,(H2,7,8)(H,9,10)/t3-/m0/s1. AuxInfo=1/1/N:4,1,3,5,8,2,7,6,9,10/E:(9
  16. aspartic acid

    https://www-jmg.ch.cam.ac.uk/data/molecules/amino/asp.html
    18 Jul 2024: university of cambridge. aspartic acid. Aspartic Acid. Asp. D. SMILES. N[C@@H](CC(O)=O)C(O)=O. Canonical SMILES NC(CC(=O)O)C(=O)O. InChI. InChI=1/C4H7NO4/c5-2(4(8)9)1-3(6)7/h2H,1,5H2,(H,6,7)(H,8,9)/t2-/m0/s1. AuxInfo=1/1/N:3,2,7,4,1,8,9,5,6/E:(6,7)(8
  17. Boltzmann Factors

    https://www-jmg.ch.cam.ac.uk/tools/magnus/boltz.html
    18 Jul 2024: university of cambridge. Boltzmann Factors. Boltzmann Factors. Paul Kirby. Sorry, your browser does not support Java. Click on the graph to find the ratio expected for a particular energy difference. The temperature (in Kelvin) may be adjusted using
  18. Optical Rotation Calculation

    https://www-jmg.ch.cam.ac.uk/tools/magnus/optRot.html
    18 Jul 2024: university of cambridge. Optical Rotation Calculation. Sorry, your web browser does not support java. Goodman Group, 2005-2024; privacy; last updated July 18, 2024.
  19. normal modes visualisation

    https://www-jmg.ch.cam.ac.uk/cil/SGTL/cadNMA.html
    18 Jul 2024: university of cambridge. normal modes visualisation. The Silicon Graphics Teaching Laboratory. has been replaced by the. Chemi cal Information Laboratory. and this information is for historical interest only. Normal Modes Visualisation. Cadpac and
  20. glutamic acid

    https://www-jmg.ch.cam.ac.uk/data/molecules/amino/glu.html
    18 Jul 2024: university of cambridge. glutamic acid. Glutamic Acid. Glu. E. SMILES. N[C@H](C(O)=O)CCC(O)=O. Canonical SMILES NC(CCC(=O)O)C(=O)O. InChI. InChI=1/C5H9NO4/c6-3(5(9)10)1-2-4(7)8/h3H,1-2,6H2,(H,7,8)(H,9,10)/t3-/m0/s1. AuxInfo=1/1/N:4,1,3,5,8,2,6,7,9,10
  21. lysine

    https://www-jmg.ch.cam.ac.uk/data/molecules/amino/lys.html
    18 Jul 2024: university of cambridge. lysine. Lysine. Lys. K. SMILES. N[C@](CCCCN)([H])C(O)=O. Canonical SMILES NCCCCC(N)C(=O)O. InChI. InChI=1/C6H14N2O2/c7-4-2-1-3-5(8)6(9)10/h5H,1-4,7-8H2,(H,9,10)/t5-/m0/s1. AuxInfo=1/1/N:5,6,3,7,2,9,8,1,10,11/E:(9,10)/it:im/rA
  22. histidine

    https://www-jmg.ch.cam.ac.uk/data/molecules/amino/his.html
    18 Jul 2024: university of cambridge. histidine. Histidine. His. H. SMILES. N[C@@H](CC1=CN=CN1)C(O)=O. Canonical SMILES NC(Cc1cnc[nH]1)C(=O)O. InChI. InChI=1/C6H9N3O2/c7-5(6(10)11)1-4-2-8-3-9-4/h2-3,5H,1,7H2,(H,8,9)(H,10,11)/t5-/m0/s1. AuxInfo=1/1/N:3,5,7,4,2,9,1
  23. VAMP notes

    https://www-jmg.ch.cam.ac.uk/cil/SGTL/vamp.html
    18 Jul 2024: university of cambridge. VAMP notes. The Silicon Graphics Teaching Laboratory. has been replaced by the. Chemi cal Information Laboratory. and this information is for historical interest only. VAMP Notes. VAMP is a semi-empirical molecular orbital
  24. proline

    https://www-jmg.ch.cam.ac.uk/data/molecules/amino/pro.html
    18 Jul 2024: university of cambridge. proline. Proline. Pro. P. SMILES. OC([C@@]1([H])NCCC1)=O. Canonical SMILES OC(=O)C1CCCN1. InChI. InChI=1/C9H11NO2/c10-8(9(11)12)6-7-4-2-1-3-5-7/h1-5,8H,6,10H2,(H,11,12)/t8-/m0/s1.
  25. The Eyring Equation

    https://www-jmg.ch.cam.ac.uk/tools/magnus/eyring.html
    18 Jul 2024: university of cambridge. The Eyring Equation. The Eyring Equation applet. Sorry, your browser does not support Java. J. M. Goodman, P. D. Kirby, and L. O. Haustedt Tetrahedron Lett. 2000, 41, 9879-9882. Goodman Group, 2005-2024; privacy; last
  26. phenylalanine

    https://www-jmg.ch.cam.ac.uk/data/molecules/amino/phe.html
    18 Jul 2024: university of cambridge. phenylalanine. Phenylalanine. Phe. F. SMILES. N[C@](CC1=CC=CC=C1)([H])C(O)=O. Canonical SMILES NC(Cc1ccccc1)C(=O)O. InChI. InChI=1/C9H11NO2/c10-8(9(11)12)6-7-4-2-1-3-5-7/h1-5,8H,6,10H2,(H,11,12)/t8-/m0/s1. AuxInfo=1/1/N:8,7,9
  27. arginine

    https://www-jmg.ch.cam.ac.uk/data/molecules/amino/arg.html
    18 Jul 2024: university of cambridge. arginine. arginine. Arg. R. SMILES. N[C@@H](CCCNC(N)=N)C(O)=O. Canonical SMILES NC(CCCNC(=N)N)C(=O)O. InChI. InChI=1/C6H14N4O2/c7-4(5(11)12)2-1-3-10-6(8)9/h4H,1-3,7H2,(H,11,12)(H4,8,9,10)/t4-/m0/s1. AuxInfo=1/1/N:4,3,5,2,10,7
  28. mopac notes

    https://www-jmg.ch.cam.ac.uk/cil/SGTL/mopac.html
    18 Jul 2024: university of cambridge. mopac notes. The Silicon Graphics Teaching Laboratory. has been replaced by the. Chemi cal Information Laboratory. and this information is for historical interest only. Mopac Notes. Mopac is a semi-empirical molecular
  29. power of prime input and output

    https://www-jmg.ch.cam.ac.uk/cil/SGTL/pp.html
    18 Jul 2024: university of cambridge. power of prime input and output. The Silicon Graphics Teaching Laboratory. has been replaced by the. Chemi cal Information Laboratory. and this information is for historical interest only. Power of Prime input and output.
  30. Concomitant Hydrate Polymorphism

    https://www-jmg.ch.cam.ac.uk/publications/cg700908m.html
    18 Jul 2024: university of cambridge. Concomitant Hydrate Polymorphism. Concomitant Hydrate Polymorphism in the Precipitation of Sparfloxacin from Aqueous Solution. A. Llinas, J. C. Burley, T. J. Prior, R. C. Glen and J. M. Goodman Cryst. Growth Des. 2008, 8, 114
  31. Ring-Opening Polymerization

    https://www-jmg.ch.cam.ac.uk/publications/jo702088c.html
    18 Jul 2024: university of cambridge. Ring-Opening Polymerization. The Mechanism of TBD-Catalyzed Ring-Opening Polymerization of Cyclic Esters. L. Simon and J. M. Goodman J. Org. Chem. 2007, 72, 9656-9662. We show that the proton-transfer process, Mechanism B
  32. Accessible Chemical Space of Alkanes

    https://www-jmg.ch.cam.ac.uk/publications/ci700246b.html
    18 Jul 2024: university of cambridge. Accessible Chemical Space of Alkanes. Exploration of the Accessible Chemical Space of Acyclic Alkanes. R. S. Paton and J. M. Goodman J. Chem. Inf. Model. 2007, 47, 2124-2132. DOI: 10.1021/ci700246b. It is not possible to
  33. alanine

    https://www-jmg.ch.cam.ac.uk/data/molecules/amino/ala.html
    18 Jul 2024: university of cambridge. alanine. alanine. Ala. A. SMILES. N[C@@H](C)C(O)=O. Canonical SMILES CC(N)C(=O)O. InChI. InChI=1/C3H7NO2/c1-2(4)3(5)6/h2H,4H2,1H3,(H,5,6)/t2-/m0/s1.
  34. tyrosine

    https://www-jmg.ch.cam.ac.uk/data/molecules/amino/tyr.html
    18 Jul 2024: university of cambridge. tyrosine. Tyrosine. Tyr. Y. SMILES. N[C@@](C(O)=O)([H])CC1=CC=C(O)C=C1. Canonical SMILES NC(Cc1ccc(O)cc1)C(=O)O. InChI. InChI=1/C9H11NO3/c10-8(9(12)13)5-6-1-3-7(11)4-2-6/h1-4,8,11H,5,10H2,(H,12,13)/t8-/m0/s1.
  35. maestro

    https://www-jmg.ch.cam.ac.uk/cil/maestro.html
    18 Jul 2024: university of cambridge. maestro. Documentation as PDF files in the directory: /usr/glea/schrodinger/docs/maestro5/pdf/. Maestro is a graphical user interface to both MacroModel and Jaguar. It is started by typing:. maestro. This command creates a
  36. Conjugate Alkenylation of Enones

    https://www-jmg.ch.cam.ac.uk/publications/jo8007463.html
    18 Jul 2024: university of cambridge. Conjugate Alkenylation of Enones. Theoretical Study of the Asymmetric Conjugate Alkenylation of Enones Catalyzed by Binaphthols. R. S. Paton, J. M. Goodman and S. C. Pellegrinet J. Org. Chem. 2008, 73, 5078-5089. DOI: 10.1021
  37. Predicting Intrinsic Aqueous Solubility

    https://www-jmg.ch.cam.ac.uk/publications/mp7000878.html
    18 Jul 2024: university of cambridge. Predicting Intrinsic Aqueous Solubility. Predicting Intrinsic Aqueous Solubility by a Thermodynamic Cycle. D. S. Palmer, A. Llinas, I. Morao, G. M. Day, J. M. Goodman, R. C. Glen, and J. B. O. Mitchell Molecular
  38. Asymmetric Allylboration

    https://www-jmg.ch.cam.ac.uk/publications/ja210200d.html
    18 Jul 2024: university of cambridge. Asymmetric Allylboration. Mechanistic Insights into the BINOL-Derived Phosphoric Acid-Catalyzed Asymmetric Allylboration of Aldehydes. M. N. Grayson, S. C. Pellegrinet and J. M. Goodman J. Am. Chem. Soc. 2012, 134,
  39. zolpidem

    https://www-jmg.ch.cam.ac.uk/data/molecules/misc/zolpidem.html
    18 Jul 2024: university of cambridge. zolpidem. Literature. Zolpidem, which is used as a sleeping pill, has also been reported to temporarily revive some people from a permanent vegetative state.
  40. writing www pages

    https://www-jmg.ch.cam.ac.uk/cil/www.html
    18 Jul 2024: university of cambridge. writing www pages. Writing WWW Pages. Help for the Chemical Information Laboratory is provided on-line using a hypertext system based on the World Wide Web. If you click on any highlighted word or phrase, you will be taken
  41. java

    https://www-jmg.ch.cam.ac.uk/cil/SGTL/java.html
    18 Jul 2024: university of cambridge. java. The Silicon Graphics Teaching Laboratory. has been replaced by the. Chemi cal Information Laboratory. and this information is for historical interest only. Java. Java is an object oriented programming language,
  42. practical three: quantitative drug design

    https://www-jmg.ch.cam.ac.uk/cil/SGTL/prac3.html
    18 Jul 2024: university of cambridge. practical three: quantitative drug design. The Silicon Graphics Teaching Laboratory. has been replaced by the. Chemical Information Laboratory. and this information is for historical interest only. Practical Three:
  43. rasmol notes

    https://www-jmg.ch.cam.ac.uk/cil/SGTL/rasmol.html
    18 Jul 2024: university of cambridge. rasmol notes. The Silicon Graphics Teaching Laboratory. has been replaced by the. Chemi cal Information Laboratory. and this information is for historical interest only. Rasmol Notes. of Rasmol documentation is only
  44. sending mail

    https://www-jmg.ch.cam.ac.uk/cil/SGTL/mail.html
    18 Jul 2024: university of cambridge. sending mail. The Silicon Graphics Teaching Laboratory. has been replaced by the. Chemi cal Information Laboratory. and this information is for historical interest only. Mail. The Silicon Graphics Workstations are not set up
  45. beilstein/crossfire

    https://www-jmg.ch.cam.ac.uk/cil/beilstein.html
    18 Jul 2024: university of cambridge. beilstein/crossfire. Beilstein. This page is now obsolete. Beilstein is available to all UK academic institutions. The service runs from Manchester. New users should read the registration information. The software and
  46. tryptophan

    https://www-jmg.ch.cam.ac.uk/data/molecules/amino/trp.html
    18 Jul 2024: university of cambridge. tryptophan. Tryptophan. Trp. W. SMILES. N[C@@]([H])(CC1=CN([H])C2=C1C=CC=C2)C(O)=O. Canonical SMILES C1=CC=C2C(=C1)C(=CN2)CC(C(=O)O)N. InChI. InChI=1/C11H13N2O2/c12-9(11(14)15)5-7-6-13-10-4-2-1-3-8(7)10/h1-4,6,9,13H,5H2,12H3,
  47. 3,3-di-tert-butyl-2,2,4,4-tetramethyl-pentane

    https://www-jmg.ch.cam.ac.uk/data/molecules/misc/c17.html
    18 Jul 2024: university of cambridge. 3,3-di-tert-butyl-2,2,4,4-tetramethyl-pentane. Literature. What Is the Smallest Saturated Acyclic Alkane that Cannot Be Made? K. M. de Silva and J. M. Goodman J. Chem. Inf. Model. 2005, 45, 81-87. DOI: 10.1021/ci0497657.
  48. 3-tert-butyl-3-isopropyl-2,2,4,4-tetramethyl-pentane

    https://www-jmg.ch.cam.ac.uk/data/molecules/misc/c16.html
    18 Jul 2024: university of cambridge. 3-tert-butyl-3-isopropyl-2,2,4,4-tetramethyl-pentane. Literature. What Is the Smallest Saturated Acyclic Alkane that Cannot Be Made? K. M. de Silva and J. M. Goodman J. Chem. Inf. Model. 2005, 45, 81-87. DOI:
  49. Michaelis Menten Equation

    https://www-jmg.ch.cam.ac.uk/tools/magnus/michmenten.html
    18 Jul 2024: university of cambridge. Michaelis Menten Equation. Michaelis-Menten. A reacts with E, and turns into B, with rate constant k. 1. , which turns into C and regenerates E, with rate constant k. 2. Now, B can turn back into A and E, with rate constant k
  50. ethane

    https://www-jmg.ch.cam.ac.uk/data/molecules/misc/ethane.html
    18 Jul 2024: university of cambridge. ethane. SMILES. CC. Canonical SMILES. CC. InChI. InChI=1/C2H6/c1-2/h1-2H3. AuxInfo=1/0/N:1,2/E:(1,2)/rA:2nCC/rB:s1;/rC:-.3572,.2062,0;.3572,-.2062,0;. MInChI v0.9. MInChIxe1 C2H6 c1xh2xsh1xh2 H3. Structure files. Updated: 9
  51. miscellaneous molecules

    https://www-jmg.ch.cam.ac.uk/data/molecules/misc/
    18 Jul 2024: university of cambridge. miscellaneous molecules. Goodman Group, 2005-2024; privacy; last updated July 18, 2024.

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