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Model Building and Refinement Practical Introduction In this…
https://www2.mrc-lmb.cam.ac.uk/personal/pemsley/coot/files/presentations/mbar.docx27 Apr 2016: 2.2.4.4. The model now looks like it fits the map a great deal better, but there is still some room for improvement so we will carry interactively refine ... 3.1.4. Leave fields “Phases”, TLS coefficients” and “Reference model” may be left as -
Calcium-mediated Evidence from the Changes in Gap Junction Low ...
https://www2.mrc-lmb.cam.ac.uk/groups/nu/pdf/jcb83.pdf1 Nov 2012: 1 B. The shoulder associated with some of the (1,0) peaks is due to contamination from the meridian. ... may exert constraints on changes, possibly leading to some distortion o f the structure. -
st7a11.qxd
https://www2.mrc-lmb.cam.ac.uk/groups/JYL/PDF/MukB%20Structure%201999.pdf10 Sep 1999: In contrast, no nucleotidebinding was found for the N-terminal 342 residues ofMukB (unpublished observations), but some hydrolysisof ATP and GTP has been reported [15]. ... 17. Miroux, B. & Walker, J.E. (1996). Overproduction of proteins inEscherichia -
plbi-04-09-03 1532..1548
https://www2.mrc-lmb.cam.ac.uk/groups/hmm/publica/SchmidBetaPaper/BetaHub.pdf31 Aug 2006: Dab2/Disabled2 (a cargo adaptor for proteins like megalin)binds to both a and b appendages, and it is likely that some ofthe other accessory proteins that bind to both a ... Nevertheless some acces-sory adaptors like b-arrestin (for internalisation of -
The Jour nal o f Cel l Bio logy ...
https://www2.mrc-lmb.cam.ac.uk/groups/hmm/publica/epsinR.pdf9 Jan 2003: Some of the key residues in the human epsinR sequence referred to in the paper are numbered. ... 4 B; see Fig. 1 D for con-structs used), to the N3 construct of epsinR, with some fur-ther clathrin binding found in the N2 construct (Fig. -
The Coot User Manual
https://www2.mrc-lmb.cam.ac.uk/personal/pemsley/coot/web/docs/coot.html1 Mar 2021: The Coot User Manual -
https://www2.mrc-lmb.cam.ac.uk/personal/pemsley/coot/files/config.log
https://www2.mrc-lmb.cam.ac.uk/personal/pemsley/coot/files/config.log10 Dec 2014: set-variable -Wno-unused-result -O -P conftest.c &5 configure:5925: /usr/bin/nm -B "conftest.o" configure:5928: output 0000000000000000 B some_variable configure:5935: result: BSD nm ... Some functions are actually named | something starting with __ and -
No Job Name
https://www2.mrc-lmb.cam.ac.uk/groups/JYL/PDF/MreC%20MM%202006.pdf7 Dec 2006: held together via hydrophobic interactions betweenleucine residues, some of them participating in a heptarepeat typical of leucine zippers (Figs 1B and 3). ... The sequence of the cytoplasmic tail of MreC isquite variable and is very short in some -
Twinning and other pathologies Andrey Lebedev CCP4 OD-‐structures…
https://www2.mrc-lmb.cam.ac.uk/wp-json/wp/v2/pages/%22https:/www2.mrc-lmb.cam.ac.uk/download/twinningaandaotherapathologiesa-andreyalebedeva-a/?wpdmdl=18788&11 Jun 2013: Twins by reAcular merohedry (inc some OD-‐twins), allotwins, disordered structures -‐ Can be readily seen in diffracAon images (with spot predicAons shown). ... Molecular Replacement: –Two structures are globally very similar (e.g. rmsd = 0.5A) -
Slide 1
https://www2.mrc-lmb.cam.ac.uk/wp-json/wp/v2/pages/%22https:/www2.mrc-lmb.cam.ac.uk/download/integration-and-scaling-harry-powell-mrc-lmb-crystallography-course-10th-may-2013/?wpdmdl=18796&13 May 2013: the spot intensity.In practice, however, there is always some background, so this needs to be taken into account. ... that spots close to each other on the detector (even on different images) have similar profiles has some validity.
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