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Ilias Moutsopoulos | Core Bioinformatics group
https://www.corebioinf.stemcells.cam.ac.uk/staff/ilias-moutsopoulos23 Feb 2024: I am currently working with dr. Irina Mohorianu as a research assistant at the Cambridge Stem Cell Institute, developing pipelines for the analysis of diverse types of data. ... Nucleic Acids Research. Contact Details. im383 at cam.ac.uk. Available for -
Toby Milne-Clark | Core Bioinformatics group
https://www.corebioinf.stemcells.cam.ac.uk/staff/toby-milne-clark23 Feb 2024: disciplines. Consequently, I studied for an MSc in Statistics and Data Science with the Université Grenoble Alpes during which I worked in multiple Research Assistant roles for various laboratories at the ... I am keen on applying machine learning -
BletchleyPark_BombeMachine.jpg | Core Bioinformatics group
https://www.corebioinf.stemcells.cam.ac.uk/file/bletchleyparkbombemachinejpg23 Feb 2024: Search site. Core Bioinformatics group. BletchleyPark_BombeMachine.jpg. The truth is rarely pure and never simple. Oscar Wilde, The Importance of Being Earnest. core-bioinformatics-website-1000.png. Wellcome - MRC Cambridge Stem Cell Institute. -
Index sort data | Core Bioinformatics group
https://www.corebioinf.stemcells.cam.ac.uk/pipelines-tools/pipelines/index-sort-data27 Jul 2024: Search site. Core Bioinformatics group. Index sort data. For the optimisation of FACS-sorted cell cultures, we have generated a pipeline identifying discriminative genes from index sort data. The pipeline uses the depth distribution of features in -
nclusters-pac-text.png | Core Bioinformatics group
https://www.corebioinf.stemcells.cam.ac.uk/file/nclusters-pac-textpng-023 Feb 2024: Search site. Core Bioinformatics group. nclusters-pac-text.png. The truth is rarely pure and never simple. Oscar Wilde, The Importance of Being Earnest. core-bioinformatics-website-1000.png. Wellcome - MRC Cambridge Stem Cell Institute. Jeffrey -
feamiR_statistical_heatmap.png | Core Bioinformatics group
https://www.corebioinf.stemcells.cam.ac.uk/file/feamirstatisticalheatmappng23 Feb 2024: Search site. Core Bioinformatics group. feamiR_statistical_heatmap.png. Alt Text:. Heatmaps illustrating chi-squared and Fisher exact p-values when assessing differences in positional proportions of single nucleotides (left) and dinucleotides (right) -
bletchleypark_september2023_2.jpg | Core Bioinformatics group
https://www.corebioinf.stemcells.cam.ac.uk/file/bletchleyparkseptember20232jpg23 Feb 2024: Search site. Core Bioinformatics group. bletchleypark_september2023_2.jpg. The truth is rarely pure and never simple. Oscar Wilde, The Importance of Being Earnest. core-bioinformatics-website-1000.png. Wellcome - MRC Cambridge Stem Cell Institute. -
bletchleypark_september2023_1.jpg | Core Bioinformatics group
https://www.corebioinf.stemcells.cam.ac.uk/file/bletchleyparkseptember20231jpg23 Feb 2024: Search site. Core Bioinformatics group. bletchleypark_september2023_1.jpg. The truth is rarely pure and never simple. Oscar Wilde, The Importance of Being Earnest. core-bioinformatics-website-1000.png. Wellcome - MRC Cambridge Stem Cell Institute. -
ChIP-Seq | Core Bioinformatics group
https://www.corebioinf.stemcells.cam.ac.uk/pipelines-tools/pipelines/chip-seq27 Jul 2024: Search site. Core Bioinformatics group. ChIP-Seq. Chromatin immunoprecipitation sequencing (ChIP-Seq) is used to analyse DNA-protein interactions. It infers the positions in a reference genome that are bound by the protein of interest. The list of -
Data denoising with noisyR | Core Bioinformatics group
https://www.corebioinf.stemcells.cam.ac.uk/pipelines-tools/tools/data-denoising-noisyr27 Jul 2024: Search site. Core Bioinformatics group. Data denoising with noisyR. The NoisyR manuscript was accepted to Nucleic Acids Research (June 2021)! -
The Noise paper is presented at UKCBCB, NRP by Ilias | Core…
https://www.corebioinf.stemcells.cam.ac.uk/news/noise-paper-presented-ukcbcb-nrp-ilias27 Jul 2024: Institute, Norwich Research Park, UK. -
Irina Mohorianu | Core Bioinformatics group
https://www.corebioinf.stemcells.cam.ac.uk/staff/irina-mohorianu23 Feb 2024: Nucleic Acids Research. bulkAnalyseR: An accessible, interactive pipeline for analysing and sharing bulk multi-modal sequencing data. -
BletchleyPark_AlanTuringStatue.jpg | Core Bioinformatics group
https://www.corebioinf.stemcells.cam.ac.uk/file/bletchleyparkalanturingstatuejpg23 Feb 2024: Search site. Core Bioinformatics group. BletchleyPark_AlanTuringStatue.jpg. The truth is rarely pure and never simple. Oscar Wilde, The Importance of Being Earnest. core-bioinformatics-website-1000.png. Wellcome - MRC Cambridge Stem Cell Institute. -
feamiR_kernel_hyperparameter.png | Core Bioinformatics group
https://www.corebioinf.stemcells.cam.ac.uk/file/feamirkernelhyperparameterpng23 Feb 2024: Search site. Core Bioinformatics group. feamiR_kernel_hyperparameter.png. Alt Text:. Performance of SVM model with a variety of kernels on seed features using 10-fold cross-validation on a set of H. sapiens miRNA/mRNA interactions validated by -
noisyR is now published in NAR | Core Bioinformatics group
https://www.corebioinf.stemcells.cam.ac.uk/news/noisyr-now-published-nar23 Feb 2024: Search site. Core Bioinformatics group. noisyR is now published in NAR. Submitted by Dr Irina Mohorianu on Sun, 04/07/2021 - 15:35. Illias' paper was acceped in NAR! Well done, Ilias! noisyR: Enhancing biological signal in sequencing datasets by -
feamiR_numtrees_hyperparameter.png | Core Bioinformatics group
https://www.corebioinf.stemcells.cam.ac.uk/file/feamirnumtreeshyperparameterpng23 Feb 2024: Search site. Core Bioinformatics group. feamiR_numtrees_hyperparameter.png. Alt Text:. Performance of RF model with a range of number of trees, from 1 to 100, using 10-fold cross-validation on a set of H. sapiens miRNA/mRNA interactions validated by -
Publications | Core Bioinformatics group
https://www.corebioinf.stemcells.cam.ac.uk/publications23 Feb 2024: Search site. Core Bioinformatics group. Publications. Core Bioinformatics group. Publications. Methods papers. 2022. ClustAssess: tools for assessing the robustness of single-cell clustering. Arash Shahsavari, Andi Munteanu, Irina Mohorianu. doi:. -
We welcome Alex and Andi! | Core Bioinformatics group
https://www.corebioinf.stemcells.cam.ac.uk/news/we-welcome-alex-and-andi23 Feb 2024: Search site. Core Bioinformatics group. We welcome Alex and Andi! Submitted by Dr Irina Mohorianu on Sun, 04/07/2021 - 15:37. We welcome Alex Calderwood (post-doc) and Andi Munteanu (intern) to the group. We're looking forward to some interesting -
Eleanor Williams | Core Bioinformatics group
https://www.corebioinf.stemcells.cam.ac.uk/staff/eleanor-williams23 Feb 2024: Presented as a poster at RECOMB 2022 (Conference on Research in Computational Molecular Biology) at University of California San Diego, USA. ... Nucleic Acids Research. feamiR: Feature selection based on Genetic Algorithms for predicting miRNA-mRNA -
Nextflow | Core Bioinformatics group
https://www.corebioinf.stemcells.cam.ac.uk/pipelines-tools/pipelines/nextflow23 Feb 2024: Search site. Core Bioinformatics group. Nextflow. enables scalable and reproducible scientific workflows using software containers. It allows the adaptation of pipelines written in the most common scripting languages. Nextflow is becoming a powerful
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