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dorinmiron.jpg | Core Bioinformatics group
https://www.corebioinf.stemcells.cam.ac.uk/file/dorinmironjpg23 Feb 2024: Search site. Core Bioinformatics group. dorinmiron.jpg. The truth is rarely pure and never simple. Oscar Wilde, The Importance of Being Earnest. core-bioinformatics-website-1000.png. Wellcome - MRC Cambridge Stem Cell Institute. Jeffrey Cheah -
KendigSham.jpg | Core Bioinformatics group
https://www.corebioinf.stemcells.cam.ac.uk/file/kendigshamjpg23 Feb 2024: Search site. Core Bioinformatics group. KendigSham.jpg. The truth is rarely pure and never simple. Oscar Wilde, The Importance of Being Earnest. core-bioinformatics-website-1000.png. Wellcome - MRC Cambridge Stem Cell Institute. Jeffrey Cheah -
We welcome Alex and Andi! | Core Bioinformatics group
https://www.corebioinf.stemcells.cam.ac.uk/news/we-welcome-alex-and-andi27 Jul 2024: Search site. Core Bioinformatics group. We welcome Alex and Andi! Submitted by Dr Irina Mohorianu on Sun, 04/07/2021 - 15:37. We welcome Alex Calderwood (post-doc) and Andi Munteanu (intern) to the group. We're looking forward to some interesting -
feamiR_ega.png | Core Bioinformatics group
https://www.corebioinf.stemcells.cam.ac.uk/file/feamiregapng23 Feb 2024: Search site. Core Bioinformatics group. feamiR_ega.png. Alt Text:. Summary of features selected by eGA on full H. sapiens positive and negative sets. Title Text:. Summary of features selected by eGA on full H. sapiens positive and negative sets. The -
Welcome Toby! | Core Bioinformatics group
https://www.corebioinf.stemcells.cam.ac.uk/news/welcome-toby23 Feb 2024: Search site. Core Bioinformatics group. Welcome Toby! Submitted by Dr Irina Mohorianu on Mon, 03/05/2021 - 06:29. We welcome a new member of the group - Toby Milne Clark! The truth is rarely pure and never simple. Oscar Wilde, The Importance of -
E. Lauzikaite | Core Bioinformatics group
https://www.corebioinf.stemcells.cam.ac.uk/users/e-lauzikaite23 Feb 2024: Search site. Core Bioinformatics group. E. Lauzikaite. Real name:. Name:. E. Lauzikaite. History. Member for. 3 years 8 months. The truth is rarely pure and never simple. Oscar Wilde, The Importance of Being Earnest. -
feamiR_ffs.png | Core Bioinformatics group
https://www.corebioinf.stemcells.cam.ac.uk/file/feamirffspng23 Feb 2024: Search site. Core Bioinformatics group. feamiR_ffs.png. Alt Text:. Improvement in performance when adding features, ordered on the x-axis, selected by FFS on a subset of the full H. sapiens dataset. Title Text:. Improvement in performance when -
Publications | Core Bioinformatics group
https://www.corebioinf.stemcells.cam.ac.uk/publications27 Jul 2024: Search site. Core Bioinformatics group. Publications. Core Bioinformatics group. Publications. Methods papers. 2022. ClustAssess: tools for assessing the robustness of single-cell clustering. Arash Shahsavari, Andi Munteanu, Irina Mohorianu. doi:. -
Nextflow | Core Bioinformatics group
https://www.corebioinf.stemcells.cam.ac.uk/pipelines-tools/pipelines/nextflow27 Jul 2024: Search site. Core Bioinformatics group. Nextflow. enables scalable and reproducible scientific workflows using software containers. It allows the adaptation of pipelines written in the most common scripting languages. Nextflow is becoming a powerful -
WilliamDunn.jpg | Core Bioinformatics group
https://www.corebioinf.stemcells.cam.ac.uk/file/williamdunnjpg23 Feb 2024: Search site. Core Bioinformatics group. WilliamDunn.jpg. The truth is rarely pure and never simple. Oscar Wilde, The Importance of Being Earnest. core-bioinformatics-website-1000.png. Wellcome - MRC Cambridge Stem Cell Institute. Jeffrey Cheah -
LiviuPirvan.png | Core Bioinformatics group
https://www.corebioinf.stemcells.cam.ac.uk/file/liviupirvanpng23 Feb 2024: Search site. Core Bioinformatics group. LiviuPirvan.png. The truth is rarely pure and never simple. Oscar Wilde, The Importance of Being Earnest. core-bioinformatics-website-1000.png. Wellcome - MRC Cambridge Stem Cell Institute. Jeffrey Cheah -
AndiMunteanu.png | Core Bioinformatics group
https://www.corebioinf.stemcells.cam.ac.uk/file/andimunteanupng23 Feb 2024: Search site. Core Bioinformatics group. AndiMunteanu.png. The truth is rarely pure and never simple. Oscar Wilde, The Importance of Being Earnest. core-bioinformatics-website-1000.png. Wellcome - MRC Cambridge Stem Cell Institute. Jeffrey Cheah -
miguel_larraz.png | Core Bioinformatics group
https://www.corebioinf.stemcells.cam.ac.uk/file/miguellarrazpng23 Feb 2024: Search site. Core Bioinformatics group. miguel_larraz.png. The truth is rarely pure and never simple. Oscar Wilde, The Importance of Being Earnest. core-bioinformatics-website-1000.png. Wellcome - MRC Cambridge Stem Cell Institute. Jeffrey Cheah -
RECOMB_Poster1.jpg | Core Bioinformatics group
https://www.corebioinf.stemcells.cam.ac.uk/file/recombposter1jpg23 Feb 2024: Search site. Core Bioinformatics group. RECOMB_Poster1.jpg. The truth is rarely pure and never simple. Oscar Wilde, The Importance of Being Earnest. core-bioinformatics-website-1000.png. Wellcome - MRC Cambridge Stem Cell Institute. Jeffrey Cheah -
RECOMB_Poster2.jpg | Core Bioinformatics group
https://www.corebioinf.stemcells.cam.ac.uk/file/recombposter2jpg23 Feb 2024: Search site. Core Bioinformatics group. RECOMB_Poster2.jpg. The truth is rarely pure and never simple. Oscar Wilde, The Importance of Being Earnest. core-bioinformatics-website-1000.png. Wellcome - MRC Cambridge Stem Cell Institute. Jeffrey Cheah -
RECOMB_Scripps.jpg | Core Bioinformatics group
https://www.corebioinf.stemcells.cam.ac.uk/file/recombscrippsjpg23 Feb 2024: Search site. Core Bioinformatics group. RECOMB_Scripps.jpg. The truth is rarely pure and never simple. Oscar Wilde, The Importance of Being Earnest. core-bioinformatics-website-1000.png. Wellcome - MRC Cambridge Stem Cell Institute. Jeffrey Cheah -
rafaelkollyfas.jpg | Core Bioinformatics group
https://www.corebioinf.stemcells.cam.ac.uk/file/rafaelkollyfasjpg23 Feb 2024: Search site. Core Bioinformatics group. rafaelkollyfas.jpg. The truth is rarely pure and never simple. Oscar Wilde, The Importance of Being Earnest. core-bioinformatics-website-1000.png. Wellcome - MRC Cambridge Stem Cell Institute. Jeffrey Cheah -
AlexCalderwood.jpg | Core Bioinformatics group
https://www.corebioinf.stemcells.cam.ac.uk/file/alexcalderwoodjpg23 Feb 2024: Search site. Core Bioinformatics group. AlexCalderwood.jpg. The truth is rarely pure and never simple. Oscar Wilde, The Importance of Being Earnest. core-bioinformatics-website-1000.png. Wellcome - MRC Cambridge Stem Cell Institute. Jeffrey Cheah -
feamiR_rf_gini.png | Core Bioinformatics group
https://www.corebioinf.stemcells.cam.ac.uk/file/feamirrfginipng23 Feb 2024: Search site. Core Bioinformatics group. feamiR_rf_gini.png. Alt Text:. Boxplot showing distribution of mean decrease in Gini index of features across 100 runs on different subsamples of the full H. sapiens dataset. Title Text:. Boxplot showing -
christmas2023_1.jpg | Core Bioinformatics group
https://www.corebioinf.stemcells.cam.ac.uk/file/christmas20231jpg23 Feb 2024: Search site. Core Bioinformatics group. christmas2023_1.jpg. The truth is rarely pure and never simple. Oscar Wilde, The Importance of Being Earnest. core-bioinformatics-website-1000.png. Wellcome - MRC Cambridge Stem Cell Institute. Jeffrey Cheah -
christmas2023_2.jpg | Core Bioinformatics group
https://www.corebioinf.stemcells.cam.ac.uk/file/christmas20232jpg23 Feb 2024: Search site. Core Bioinformatics group. christmas2023_2.jpg. The truth is rarely pure and never simple. Oscar Wilde, The Importance of Being Earnest. core-bioinformatics-website-1000.png. Wellcome - MRC Cambridge Stem Cell Institute. Jeffrey Cheah -
Dorin Miron | Core Bioinformatics group
https://www.corebioinf.stemcells.cam.ac.uk/staff/dorin-miron23 Feb 2024: Search site. Core Bioinformatics group. Dorin Miron. MSc and BSc Computer Science. I graduated BSc and MSc in Computer Science from Cuza University in Iasi, Romania. Starting with a deep interest in programming and software engineering, I further -
feamiRworkflow.png | Core Bioinformatics group
https://www.corebioinf.stemcells.cam.ac.uk/file/feamirworkflowpng23 Feb 2024: Search site. Core Bioinformatics group. feamiRworkflow.png. Alt Text:. Overview of the feamiR workflow. Title Text:. Overview of the feamiR workflow. The truth is rarely pure and never simple. Oscar Wilde, The Importance of Being Earnest. -
We are hiring! | Core Bioinformatics group
https://www.corebioinf.stemcells.cam.ac.uk/news/we-are-hiring23 Feb 2024: Lauzikaite on Thu, 04/02/2021 - 16:02. A Research Assistant/Associate - Bioinformatician position has opened in our lab! -
Dr Irina Mohorianu | Core Bioinformatics group
https://www.corebioinf.stemcells.cam.ac.uk/users/dr-irina-mohorianu23 Feb 2024: Search site. Core Bioinformatics group. Dr Irina Mohorianu. Real name:. Name:. Dr Irina Mohorianu. History. Member for. 3 years 9 months. The truth is rarely pure and never simple. Oscar Wilde, The Importance of Being Earnest. -
cristianbulgaru.png | Core Bioinformatics group
https://www.corebioinf.stemcells.cam.ac.uk/file/cristianbulgarupng23 Feb 2024: Search site. Core Bioinformatics group. cristianbulgaru.png. The truth is rarely pure and never simple. Oscar Wilde, The Importance of Being Earnest. core-bioinformatics-website-1000.png. Wellcome - MRC Cambridge Stem Cell Institute. Jeffrey Cheah -
eleanor_williams.jpg | Core Bioinformatics group
https://www.corebioinf.stemcells.cam.ac.uk/file/eleanorwilliamsjpg23 Feb 2024: Search site. Core Bioinformatics group. eleanor_williams.jpg. The truth is rarely pure and never simple. Oscar Wilde, The Importance of Being Earnest. core-bioinformatics-website-1000.png. Wellcome - MRC Cambridge Stem Cell Institute. Jeffrey Cheah -
arash_shahsavari.jpg | Core Bioinformatics group
https://www.corebioinf.stemcells.cam.ac.uk/file/arashshahsavarijpg23 Feb 2024: Search site. Core Bioinformatics group. arash_shahsavari.jpg. The truth is rarely pure and never simple. Oscar Wilde, The Importance of Being Earnest. core-bioinformatics-website-1000.png. Wellcome - MRC Cambridge Stem Cell Institute. Jeffrey Cheah -
Group members | Core Bioinformatics group
https://www.corebioinf.stemcells.cam.ac.uk/group-members23 Feb 2024: Research Assistant (2022 - ). MPhil Student in Health Data Science (2022- ); Primary supervisor: Irina Mohorianu. ... Chenge (Joanna) Du (December 2022 - July 2023) Research Assistant, Cambridge Cancer Institute, CRUK. -
Miguel Larraz | Core Bioinformatics group
https://www.corebioinf.stemcells.cam.ac.uk/staff/miguel-larraz23 Feb 2024: My MSc research project was focused on building a pipeline for Targeted NGS reads in a gene panel for Colorectal cancer; these were summarised in features for the data-driven prediction ... During this initial research, I got interested in understanding -
noisyr_plot_pcc.png | Core Bioinformatics group
https://www.corebioinf.stemcells.cam.ac.uk/file/noisyrplotpccpng23 Feb 2024: Search site. Core Bioinformatics group. noisyr_plot_pcc.png. Alt Text:. Indicative plots of the Pearson correlation calculated on windows of increasing average abundance for the count matrix-based noise removal approach (left) and per exon for the -
Liviu Pirvan | Core Bioinformatics group
https://www.corebioinf.stemcells.cam.ac.uk/staff/liviu-pirvan23 Feb 2024: Search site. Core Bioinformatics group. Liviu Pirvan. PhD Medical Science. MRes Machine Learning. BEng Computer Science. I completed my BEng in Computer Science at the University of York, my MRes in Machine Learning at Imperial College London, and -
Floris Johan Maria Roos | Core Bioinformatics group
https://www.corebioinf.stemcells.cam.ac.uk/staff/floris-johan-maria-roos27 Jul 2024: T.M.A.L. Klem and dr. B.P.L. Wijnhoven) and started conducting research into the bile ducts, resulting in his first publication. ... Ludovic Vallier). Currently, he restarted working at the University of Cambridge as a clinical research fellow as well as -
Andi Munteanu | Core Bioinformatics group
https://www.corebioinf.stemcells.cam.ac.uk/staff/andi-munteanu23 Feb 2024: This MSc balances taught modules and research; for the latter, over the last year, I focused on the topic of clustering stability on biological data (single cell high throughput expression data). -
BletchleyFeb2023_1.png | Core Bioinformatics group
https://www.corebioinf.stemcells.cam.ac.uk/file/bletchleyfeb20231png23 Feb 2024: Search site. Core Bioinformatics group. BletchleyFeb2023_1.png. The truth is rarely pure and never simple. Oscar Wilde, The Importance of Being Earnest. core-bioinformatics-website-1000.png. Wellcome - MRC Cambridge Stem Cell Institute. Jeffrey -
bulk_rnaseq_jaccard.png | Core Bioinformatics group
https://www.corebioinf.stemcells.cam.ac.uk/file/bulkrnaseqjaccardpng23 Feb 2024: Search site. Core Bioinformatics group. bulk_rnaseq_jaccard.png. The truth is rarely pure and never simple. Oscar Wilde, The Importance of Being Earnest. core-bioinformatics-website-1000.png. Wellcome - MRC Cambridge Stem Cell Institute. Jeffrey -
bulk_rnaseq_volcano.png | Core Bioinformatics group
https://www.corebioinf.stemcells.cam.ac.uk/file/bulkrnaseqvolcanopng23 Feb 2024: Search site. Core Bioinformatics group. bulk_rnaseq_volcano.png. The truth is rarely pure and never simple. Oscar Wilde, The Importance of Being Earnest. core-bioinformatics-website-1000.png. Wellcome - MRC Cambridge Stem Cell Institute. Jeffrey -
Data | Core Bioinformatics group
https://www.corebioinf.stemcells.cam.ac.uk/data23 Feb 2024: Search site. Core Bioinformatics group. Data. Core Bioinformatics group. Data. Data acquisition, traceability and curation. We operate a strict policy of experimental record-keeping with traceable identifiers for each experiment that are linked to -
Cristian Bulgaru | Core Bioinformatics group
https://www.corebioinf.stemcells.cam.ac.uk/staff/cristian-bulgaru23 Feb 2024: Search site. Core Bioinformatics group. Cristian Bulgaru. MSc Artificial Intelligence and Optimization (2022-). Data Science Starter Program (2022-2023). Currently enrolled in the Artificial Intelligence and Optimization MSc program at University A. -
Alex Calderwood | Core Bioinformatics group
https://www.corebioinf.stemcells.cam.ac.uk/staff/alex-calderwood23 Feb 2024: Before working at the CSCI I was a post-doc at the John Innes Centre, Norwich Research Park, UK, where I worked on comparative transcriptomics over plant development. -
BletchleyPark_House.jpg | Core Bioinformatics group
https://www.corebioinf.stemcells.cam.ac.uk/file/bletchleyparkhousejpg23 Feb 2024: Search site. Core Bioinformatics group. BletchleyPark_House.jpg. The truth is rarely pure and never simple. Oscar Wilde, The Importance of Being Earnest. core-bioinformatics-website-1000.png. Wellcome - MRC Cambridge Stem Cell Institute. Jeffrey -
Cameron Crawford | Core Bioinformatics group
https://www.corebioinf.stemcells.cam.ac.uk/staff/cameron-crawford23 Feb 2024: Search site. Core Bioinformatics group. Cameron Crawford. I started my Bachelor's degree in Computer Science at the University of Cambridge in 2021 and joined the Core Bioinformatics group as an intern at the end of my first year. Throughout my -
feamiR_dtree_voting.png | Core Bioinformatics group
https://www.corebioinf.stemcells.cam.ac.uk/file/feamirdtreevotingpng23 Feb 2024: Search site. Core Bioinformatics group. feamiR_dtree_voting.png. Alt Text:. Boxplot showing distribution, on DTs, over 100 subsamples of the full H. sapiens dataset. Title Text:. Boxplot showing distribution, on DTs, over 100 subsamples of the full H -
Image processing | Core Bioinformatics group
https://www.corebioinf.stemcells.cam.ac.uk/pipelines-tools/tools/image-processing27 Jul 2024: Search site. Core Bioinformatics group. Image processing. We are developing an imaging processing pipeline which would help us achieve the 3D localization of the fluorescent molecules analysed with the DHPSF microscope. The video is first stacked -
ClustAssess is on biorxiv! | Core Bioinformatics group
https://www.corebioinf.stemcells.cam.ac.uk/news/clustassess-biorxiv23 Feb 2024: Search site. Core Bioinformatics group. ClustAssess is on biorxiv! Submitted by Dr Irina Mohorianu on Fri, 04/02/2022 - 06:24. A new preprint (describing ClustAssess) is on bioarxiv:. “ClustAssess: tools for assessing the robustness of single-cell -
FlorisJohanMariaRoos.jpg | Core Bioinformatics group
https://www.corebioinf.stemcells.cam.ac.uk/file/florisjohanmariaroosjpg23 Feb 2024: Search site. Core Bioinformatics group. FlorisJohanMariaRoos.jpg. The truth is rarely pure and never simple. Oscar Wilde, The Importance of Being Earnest. core-bioinformatics-website-1000.png. Wellcome - MRC Cambridge Stem Cell Institute. Jeffrey -
alternative-splicing.jpg | Core Bioinformatics group
https://www.corebioinf.stemcells.cam.ac.uk/file/alternative-splicingjpg23 Feb 2024: Search site. Core Bioinformatics group. alternative-splicing.jpg. The truth is rarely pure and never simple. Oscar Wilde, The Importance of Being Earnest. core-bioinformatics-website-1000.png. Wellcome - MRC Cambridge Stem Cell Institute. Jeffrey -
bulkAnalyseR is on biorxiv! | Core Bioinformatics group
https://www.corebioinf.stemcells.cam.ac.uk/news/bulkanalyser-biorxiv23 Feb 2024: Search site. Core Bioinformatics group. bulkAnalyseR is on biorxiv! Submitted by Dr Irina Mohorianu on Fri, 04/02/2022 - 06:20. A new preprint (describing bulkAnalyseR) is on bioarxiv:. “bulkAnalyseR: An accessible, interactive pipeline for -
Arash Shahsavari | Core Bioinformatics group
https://www.corebioinf.stemcells.cam.ac.uk/staff/arash-shahsavari23 Feb 2024: Search site. Core Bioinformatics group. Arash Shahsavari. MSc Complex Adaptive Systems (2019). In 2019 I finished my master’s studies at Chalmers University of Technology, in Gothenburg, Sweden, with a thesis on single-cell RNA-seq clustering and -
image_processing_panels.png | Core Bioinformatics group
https://www.corebioinf.stemcells.cam.ac.uk/file/imageprocessingpanelspng23 Feb 2024: Search site. Core Bioinformatics group. image_processing_panels.png. The truth is rarely pure and never simple. Oscar Wilde, The Importance of Being Earnest. core-bioinformatics-website-1000.png. Wellcome - MRC Cambridge Stem Cell Institute. Jeffrey
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