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61 - 110 of 110 search results for `Research news` |u:www.corebioinf.stemcells.cam.ac.uk

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  2. AndiMunteanu.png | Core Bioinformatics group

    https://www.corebioinf.stemcells.cam.ac.uk/file/andimunteanupng
    23 Feb 2024: Search site. Core Bioinformatics group. AndiMunteanu.png. The truth is rarely pure and never simple. Oscar Wilde, The Importance of Being Earnest. core-bioinformatics-website-1000.png. Wellcome - MRC Cambridge Stem Cell Institute. Jeffrey Cheah

  3. Excellent end of the year - with two papers accepted in December! |…

    https://www.corebioinf.stemcells.cam.ac.uk/news/excellent-end-year-two-papers-accepted-december
    23 Feb 2024: Search site. Core Bioinformatics group. Excellent end of the year - with two papers accepted in December! Submitted by Dr Irina Mohorianu on Wed, 28/12/2022 - 12:26. Two papers were accepted in December! bulkAnalyseR: An accessible, interactive

  4. Single cell RNA-Seq | Core Bioinformatics group

    https://www.corebioinf.stemcells.cam.ac.uk/pipelines-tools/pipelines/single-cell-rna-seq
    23 Feb 2024: Search site. Core Bioinformatics group. Single cell RNA-Seq. Smart-Seq pipeline. Smart-seq and Smart-Seq2 are popular protocols for single-cell RNA-sequencing. With these protocols, 96-well plates are used with individual cells placed in each well.

  5. Irina Mohorianu | Core Bioinformatics group

    https://www.corebioinf.stemcells.cam.ac.uk/staff/irina-mohorianu
    23 Feb 2024: Nucleic Acids Research. bulkAnalyseR: An accessible, interactive pipeline for analysing and sharing bulk multi-modal sequencing data.

  6. miguel_larraz.png | Core Bioinformatics group

    https://www.corebioinf.stemcells.cam.ac.uk/file/miguellarrazpng
    23 Feb 2024: Search site. Core Bioinformatics group. miguel_larraz.png. The truth is rarely pure and never simple. Oscar Wilde, The Importance of Being Earnest. core-bioinformatics-website-1000.png. Wellcome - MRC Cambridge Stem Cell Institute. Jeffrey Cheah

  7. Eleanor Williams | Core Bioinformatics group

    https://www.corebioinf.stemcells.cam.ac.uk/staff/eleanor-williams
    23 Feb 2024: Presented as a poster at RECOMB 2022 (Conference on Research in Computational Molecular Biology) at University of California San Diego, USA. ... Nucleic Acids Research. feamiR: Feature selection based on Genetic Algorithms for predicting miRNA-mRNA

  8. Analysis of mRNA-Seq alternative splicing | Core Bioinformatics group

    https://www.corebioinf.stemcells.cam.ac.uk/pipelines-tools/pipelines/analysis-mrna-seq-alternative-splicing
    23 Feb 2024: Search site. Core Bioinformatics group. Analysis of mRNA-Seq alternative splicing. Our pipeline uses rMATS to quantify alternative splicing events. rMATS detects five different types of events, as in the figure below. When quantifying events, two

  9. RECOMB_Poster1.jpg | Core Bioinformatics group

    https://www.corebioinf.stemcells.cam.ac.uk/file/recombposter1jpg
    23 Feb 2024: Search site. Core Bioinformatics group. RECOMB_Poster1.jpg. The truth is rarely pure and never simple. Oscar Wilde, The Importance of Being Earnest. core-bioinformatics-website-1000.png. Wellcome - MRC Cambridge Stem Cell Institute. Jeffrey Cheah

  10. NOTCH1 drives immune-escape mechanisms in B cell malignancies | Core…

    https://www.corebioinf.stemcells.cam.ac.uk/news/notch1-drives-immune-escape-mechanisms-b-cell-malignancies
    23 Feb 2024: Search site. Core Bioinformatics group. NOTCH1 drives immune-escape mechanisms in B cell malignancies. Submitted by Dr Irina Mohorianu on Mon, 03/05/2021 - 06:28. A new paper in collaboration with Dr Ingo Ringshausen has been submitted to biorXiv.

  11. RECOMB_Poster2.jpg | Core Bioinformatics group

    https://www.corebioinf.stemcells.cam.ac.uk/file/recombposter2jpg
    23 Feb 2024: Search site. Core Bioinformatics group. RECOMB_Poster2.jpg. The truth is rarely pure and never simple. Oscar Wilde, The Importance of Being Earnest. core-bioinformatics-website-1000.png. Wellcome - MRC Cambridge Stem Cell Institute. Jeffrey Cheah

  12. Floris Johan Maria Roos | Core Bioinformatics group

    https://www.corebioinf.stemcells.cam.ac.uk/staff/floris-johan-maria-roos
    23 Feb 2024: T.M.A.L. Klem and dr. B.P.L. Wijnhoven) and started conducting research into the bile ducts, resulting in his first publication. ... Ludovic Vallier). Currently, he restarted working at the University of Cambridge as a clinical research fellow as well as

  13. feamiR is presented at the Heidelberg Non-coding genome symposium by…

    https://www.corebioinf.stemcells.cam.ac.uk/news/feamir-presented-heidelberg-non-coding-genome-symposium-eleanor
    23 Feb 2024: Search site. Core Bioinformatics group. feamiR is presented at the Heidelberg Non-coding genome symposium by Eleanor. Submitted by Dr Irina Mohorianu on Thu, 14/10/2021 - 15:34. The feamiR tool, for predicting microRNA/mRNA interactions is presented

  14. Shiny apps for bulk data with bulkAnalyseR | Core Bioinformatics group

    https://www.corebioinf.stemcells.cam.ac.uk/pipelines-tools/tools/shiny-apps-bulk-data-bulkanalyser
    23 Feb 2024: Moreover, the app can be easily shared and published, incentivising research reproducibility and allowing others to explore the same processed data.

  15. RECOMB_Scripps.jpg | Core Bioinformatics group

    https://www.corebioinf.stemcells.cam.ac.uk/file/recombscrippsjpg
    23 Feb 2024: Search site. Core Bioinformatics group. RECOMB_Scripps.jpg. The truth is rarely pure and never simple. Oscar Wilde, The Importance of Being Earnest. core-bioinformatics-website-1000.png. Wellcome - MRC Cambridge Stem Cell Institute. Jeffrey Cheah

  16. Defining the transcriptional signature of esophageal-to-skin lineage…

    https://www.corebioinf.stemcells.cam.ac.uk/news/defining-transcriptional-signature-esophageal-skin-lineage-conversion
    23 Feb 2024: Search site. Core Bioinformatics group. Defining the transcriptional signature of esophageal-to-skin lineage conversion. Submitted by Dr Irina Mohorianu on Sun, 28/03/2021 - 16:18. A new paper in collaboration with Dr Maria Alcolea has been

  17. feamiR_rf_gini.png | Core Bioinformatics group

    https://www.corebioinf.stemcells.cam.ac.uk/file/feamirrfginipng
    23 Feb 2024: Search site. Core Bioinformatics group. feamiR_rf_gini.png. Alt Text:. Boxplot showing distribution of mean decrease in Gini index of features across 100 runs on different subsamples of the full H. sapiens dataset. Title Text:. Boxplot showing

  18. miRNA classification with feamiR | Core Bioinformatics group

    https://www.corebioinf.stemcells.cam.ac.uk/pipelines-tools/tools/mirna-classification-feamir
    23 Feb 2024: Search site. Core Bioinformatics group. miRNA classification with feamiR. microRNAs play a key role in RNA interference, the sequence-driven targeting of mRNAs that regulates their translation to proteins, through translation inhibition or the

  19. rafaelkollyfas.jpg | Core Bioinformatics group

    https://www.corebioinf.stemcells.cam.ac.uk/file/rafaelkollyfasjpg
    23 Feb 2024: Search site. Core Bioinformatics group. rafaelkollyfas.jpg. The truth is rarely pure and never simple. Oscar Wilde, The Importance of Being Earnest. core-bioinformatics-website-1000.png. Wellcome - MRC Cambridge Stem Cell Institute. Jeffrey Cheah

  20. AlexCalderwood.jpg | Core Bioinformatics group

    https://www.corebioinf.stemcells.cam.ac.uk/file/alexcalderwoodjpg
    23 Feb 2024: Search site. Core Bioinformatics group. AlexCalderwood.jpg. The truth is rarely pure and never simple. Oscar Wilde, The Importance of Being Earnest. core-bioinformatics-website-1000.png. Wellcome - MRC Cambridge Stem Cell Institute. Jeffrey Cheah

  21. Mapping the biogenesis of forward programmed megakaryocytes from…

    https://www.corebioinf.stemcells.cam.ac.uk/news/mapping-biogenesis-forward-programmed-megakaryocytes-induced-pluripotent-stem-cells
    23 Feb 2024: Search site. Core Bioinformatics group. Mapping the biogenesis of forward programmed megakaryocytes from induced pluripotent stem cells. Submitted by Dr Irina Mohorianu on Mon, 03/05/2021 - 12:02. A new paper in collaboration with Dr Cedric Ghevaert

  22. christmas2023_1.jpg | Core Bioinformatics group

    https://www.corebioinf.stemcells.cam.ac.uk/file/christmas20231jpg
    23 Feb 2024: Search site. Core Bioinformatics group. christmas2023_1.jpg. The truth is rarely pure and never simple. Oscar Wilde, The Importance of Being Earnest. core-bioinformatics-website-1000.png. Wellcome - MRC Cambridge Stem Cell Institute. Jeffrey Cheah

  23. christmas2023_2.jpg | Core Bioinformatics group

    https://www.corebioinf.stemcells.cam.ac.uk/file/christmas20232jpg
    23 Feb 2024: Search site. Core Bioinformatics group. christmas2023_2.jpg. The truth is rarely pure and never simple. Oscar Wilde, The Importance of Being Earnest. core-bioinformatics-website-1000.png. Wellcome - MRC Cambridge Stem Cell Institute. Jeffrey Cheah

  24. ZAP-70 constitutively regulates gene expression and protein synthesis …

    https://www.corebioinf.stemcells.cam.ac.uk/news/zap-70-constitutively-regulates-gene-expression-and-protein-synthesis-chronic-lymphocytic
    23 Feb 2024: Search site. Core Bioinformatics group. ZAP-70 constitutively regulates gene expression and protein synthesis in chronic lymphocytic leukemia. Submitted by Dr Irina Mohorianu on Sun, 28/03/2021 - 16:14. A new paper in collaboration with Dr Ingo

  25. feamiRworkflow.png | Core Bioinformatics group

    https://www.corebioinf.stemcells.cam.ac.uk/file/feamirworkflowpng
    23 Feb 2024: Search site. Core Bioinformatics group. feamiRworkflow.png. Alt Text:. Overview of the feamiR workflow. Title Text:. Overview of the feamiR workflow. The truth is rarely pure and never simple. Oscar Wilde, The Importance of Being Earnest.

  26. cristianbulgaru.png | Core Bioinformatics group

    https://www.corebioinf.stemcells.cam.ac.uk/file/cristianbulgarupng
    23 Feb 2024: Search site. Core Bioinformatics group. cristianbulgaru.png. The truth is rarely pure and never simple. Oscar Wilde, The Importance of Being Earnest. core-bioinformatics-website-1000.png. Wellcome - MRC Cambridge Stem Cell Institute. Jeffrey Cheah

  27. The sum of two halves may be different from the whole. Effects of…

    https://www.corebioinf.stemcells.cam.ac.uk/news/sum-two-halves-may-be-different-whole-effects-splitting-sequencing-samples-across-lanes
    23 Feb 2024: Search site. Core Bioinformatics group. The sum of two halves may be different from the whole. Effects of splitting sequencing samples across lanes. Submitted by Dr Irina Mohorianu on Tue, 11/05/2021 - 18:55. A new methods paper from our group was

  28. eleanor_williams.jpg | Core Bioinformatics group

    https://www.corebioinf.stemcells.cam.ac.uk/file/eleanorwilliamsjpg
    23 Feb 2024: Search site. Core Bioinformatics group. eleanor_williams.jpg. The truth is rarely pure and never simple. Oscar Wilde, The Importance of Being Earnest. core-bioinformatics-website-1000.png. Wellcome - MRC Cambridge Stem Cell Institute. Jeffrey Cheah

  29. arash_shahsavari.jpg | Core Bioinformatics group

    https://www.corebioinf.stemcells.cam.ac.uk/file/arashshahsavarijpg
    23 Feb 2024: Search site. Core Bioinformatics group. arash_shahsavari.jpg. The truth is rarely pure and never simple. Oscar Wilde, The Importance of Being Earnest. core-bioinformatics-website-1000.png. Wellcome - MRC Cambridge Stem Cell Institute. Jeffrey Cheah

  30. noisyr_plot_pcc.png | Core Bioinformatics group

    https://www.corebioinf.stemcells.cam.ac.uk/file/noisyrplotpccpng
    23 Feb 2024: Search site. Core Bioinformatics group. noisyr_plot_pcc.png. Alt Text:. Indicative plots of the Pearson correlation calculated on windows of increasing average abundance for the count matrix-based noise removal approach (left) and per exon for the

  31. BletchleyFeb2023_1.png | Core Bioinformatics group

    https://www.corebioinf.stemcells.cam.ac.uk/file/bletchleyfeb20231png
    23 Feb 2024: Search site. Core Bioinformatics group. BletchleyFeb2023_1.png. The truth is rarely pure and never simple. Oscar Wilde, The Importance of Being Earnest. core-bioinformatics-website-1000.png. Wellcome - MRC Cambridge Stem Cell Institute. Jeffrey

  32. bulk_rnaseq_jaccard.png | Core Bioinformatics group

    https://www.corebioinf.stemcells.cam.ac.uk/file/bulkrnaseqjaccardpng
    23 Feb 2024: Search site. Core Bioinformatics group. bulk_rnaseq_jaccard.png. The truth is rarely pure and never simple. Oscar Wilde, The Importance of Being Earnest. core-bioinformatics-website-1000.png. Wellcome - MRC Cambridge Stem Cell Institute. Jeffrey

  33. bulk_rnaseq_volcano.png | Core Bioinformatics group

    https://www.corebioinf.stemcells.cam.ac.uk/file/bulkrnaseqvolcanopng
    23 Feb 2024: Search site. Core Bioinformatics group. bulk_rnaseq_volcano.png. The truth is rarely pure and never simple. Oscar Wilde, The Importance of Being Earnest. core-bioinformatics-website-1000.png. Wellcome - MRC Cambridge Stem Cell Institute. Jeffrey

  34. BletchleyPark_House.jpg | Core Bioinformatics group

    https://www.corebioinf.stemcells.cam.ac.uk/file/bletchleyparkhousejpg
    23 Feb 2024: Search site. Core Bioinformatics group. BletchleyPark_House.jpg. The truth is rarely pure and never simple. Oscar Wilde, The Importance of Being Earnest. core-bioinformatics-website-1000.png. Wellcome - MRC Cambridge Stem Cell Institute. Jeffrey

  35. feamiR_dtree_voting.png | Core Bioinformatics group

    https://www.corebioinf.stemcells.cam.ac.uk/file/feamirdtreevotingpng
    23 Feb 2024: Search site. Core Bioinformatics group. feamiR_dtree_voting.png. Alt Text:. Boxplot showing distribution, on DTs, over 100 subsamples of the full H. sapiens dataset. Title Text:. Boxplot showing distribution, on DTs, over 100 subsamples of the full H

  36. FlorisJohanMariaRoos.jpg | Core Bioinformatics group

    https://www.corebioinf.stemcells.cam.ac.uk/file/florisjohanmariaroosjpg
    23 Feb 2024: Search site. Core Bioinformatics group. FlorisJohanMariaRoos.jpg. The truth is rarely pure and never simple. Oscar Wilde, The Importance of Being Earnest. core-bioinformatics-website-1000.png. Wellcome - MRC Cambridge Stem Cell Institute. Jeffrey

  37. alternative-splicing.jpg | Core Bioinformatics group

    https://www.corebioinf.stemcells.cam.ac.uk/file/alternative-splicingjpg
    23 Feb 2024: Search site. Core Bioinformatics group. alternative-splicing.jpg. The truth is rarely pure and never simple. Oscar Wilde, The Importance of Being Earnest. core-bioinformatics-website-1000.png. Wellcome - MRC Cambridge Stem Cell Institute. Jeffrey

  38. image_processing_panels.png | Core Bioinformatics group

    https://www.corebioinf.stemcells.cam.ac.uk/file/imageprocessingpanelspng
    23 Feb 2024: Search site. Core Bioinformatics group. image_processing_panels.png. The truth is rarely pure and never simple. Oscar Wilde, The Importance of Being Earnest. core-bioinformatics-website-1000.png. Wellcome - MRC Cambridge Stem Cell Institute. Jeffrey

  39. feamiR_feature_heatmap.png | Core Bioinformatics group

    https://www.corebioinf.stemcells.cam.ac.uk/file/feamirfeatureheatmappng
    23 Feb 2024: Search site. Core Bioinformatics group. feamiR_feature_heatmap.png. Alt Text:. Heatmap showing the discriminative power of features across the 5 feature-selection methods on the full H. sapiens positive set. Title Text:. Heatmap showing the

  40. BletchleyFebruary2023_3.jpg | Core Bioinformatics group

    https://www.corebioinf.stemcells.cam.ac.uk/file/bletchleyfebruary20233jpg
    23 Feb 2024: Search site. Core Bioinformatics group. BletchleyFebruary2023_3.jpg. The truth is rarely pure and never simple. Oscar Wilde, The Importance of Being Earnest. core-bioinformatics-website-1000.png. Wellcome - MRC Cambridge Stem Cell Institute. Jeffrey

  41. BletchleyFebruary2023_2.jpg | Core Bioinformatics group

    https://www.corebioinf.stemcells.cam.ac.uk/file/bletchleyfebruary20232jpg
    23 Feb 2024: Search site. Core Bioinformatics group. BletchleyFebruary2023_2.jpg. The truth is rarely pure and never simple. Oscar Wilde, The Importance of Being Earnest. core-bioinformatics-website-1000.png. Wellcome - MRC Cambridge Stem Cell Institute. Jeffrey

  42. cameroncrawford_photo.jpeg | Core Bioinformatics group

    https://www.corebioinf.stemcells.cam.ac.uk/file/cameroncrawfordphotojpeg-0
    23 Feb 2024: Search site. Core Bioinformatics group. cameroncrawford_photo.jpeg. The truth is rarely pure and never simple. Oscar Wilde, The Importance of Being Earnest. core-bioinformatics-website-1000.png. Wellcome - MRC Cambridge Stem Cell Institute. Jeffrey

  43. BletchleyPark_BombeMachine.jpg | Core Bioinformatics group

    https://www.corebioinf.stemcells.cam.ac.uk/file/bletchleyparkbombemachinejpg
    23 Feb 2024: Search site. Core Bioinformatics group. BletchleyPark_BombeMachine.jpg. The truth is rarely pure and never simple. Oscar Wilde, The Importance of Being Earnest. core-bioinformatics-website-1000.png. Wellcome - MRC Cambridge Stem Cell Institute.

  44. nclusters-pac-text.png | Core Bioinformatics group

    https://www.corebioinf.stemcells.cam.ac.uk/file/nclusters-pac-textpng-0
    23 Feb 2024: Search site. Core Bioinformatics group. nclusters-pac-text.png. The truth is rarely pure and never simple. Oscar Wilde, The Importance of Being Earnest. core-bioinformatics-website-1000.png. Wellcome - MRC Cambridge Stem Cell Institute. Jeffrey

  45. feamiR_statistical_heatmap.png | Core Bioinformatics group

    https://www.corebioinf.stemcells.cam.ac.uk/file/feamirstatisticalheatmappng
    23 Feb 2024: Search site. Core Bioinformatics group. feamiR_statistical_heatmap.png. Alt Text:. Heatmaps illustrating chi-squared and Fisher exact p-values when assessing differences in positional proportions of single nucleotides (left) and dinucleotides (right)

  46. bletchleypark_september2023_2.jpg | Core Bioinformatics group

    https://www.corebioinf.stemcells.cam.ac.uk/file/bletchleyparkseptember20232jpg
    23 Feb 2024: Search site. Core Bioinformatics group. bletchleypark_september2023_2.jpg. The truth is rarely pure and never simple. Oscar Wilde, The Importance of Being Earnest. core-bioinformatics-website-1000.png. Wellcome - MRC Cambridge Stem Cell Institute.

  47. bletchleypark_september2023_1.jpg | Core Bioinformatics group

    https://www.corebioinf.stemcells.cam.ac.uk/file/bletchleyparkseptember20231jpg
    23 Feb 2024: Search site. Core Bioinformatics group. bletchleypark_september2023_1.jpg. The truth is rarely pure and never simple. Oscar Wilde, The Importance of Being Earnest. core-bioinformatics-website-1000.png. Wellcome - MRC Cambridge Stem Cell Institute.

  48. BletchleyPark_AlanTuringStatue.jpg | Core Bioinformatics group

    https://www.corebioinf.stemcells.cam.ac.uk/file/bletchleyparkalanturingstatuejpg
    23 Feb 2024: Search site. Core Bioinformatics group. BletchleyPark_AlanTuringStatue.jpg. The truth is rarely pure and never simple. Oscar Wilde, The Importance of Being Earnest. core-bioinformatics-website-1000.png. Wellcome - MRC Cambridge Stem Cell Institute.

  49. feamiR_kernel_hyperparameter.png | Core Bioinformatics group

    https://www.corebioinf.stemcells.cam.ac.uk/file/feamirkernelhyperparameterpng
    23 Feb 2024: Search site. Core Bioinformatics group. feamiR_kernel_hyperparameter.png. Alt Text:. Performance of SVM model with a variety of kernels on seed features using 10-fold cross-validation on a set of H. sapiens miRNA/mRNA interactions validated by

  50. feamiR_numtrees_hyperparameter.png | Core Bioinformatics group

    https://www.corebioinf.stemcells.cam.ac.uk/file/feamirnumtreeshyperparameterpng
    23 Feb 2024: Search site. Core Bioinformatics group. feamiR_numtrees_hyperparameter.png. Alt Text:. Performance of RF model with a range of number of trees, from 1 to 100, using 10-fold cross-validation on a set of H. sapiens miRNA/mRNA interactions validated by

  51. core-bioinformatics-website-1000.png | Core Bioinformatics group

    https://www.corebioinf.stemcells.cam.ac.uk/file/core-bioinformatics-website-1000png-2
    23 Feb 2024: Search site. Core Bioinformatics group. core-bioinformatics-website-1000.png. The truth is rarely pure and never simple. Oscar Wilde, The Importance of Being Earnest. core-bioinformatics-website-1000.png. Wellcome - MRC Cambridge Stem Cell

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