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bulk_rnaseq_jaccard.png | Core Bioinformatics group
https://www.corebioinf.stemcells.cam.ac.uk/file/bulkrnaseqjaccardpng27 Jul 2024: Search site. Core Bioinformatics group. bulk_rnaseq_jaccard.png. The truth is rarely pure and never simple. Oscar Wilde, The Importance of Being Earnest. core-bioinformatics-website-1000.png. Wellcome - MRC Cambridge Stem Cell Institute. Jeffrey -
bulk_rnaseq_volcano.png | Core Bioinformatics group
https://www.corebioinf.stemcells.cam.ac.uk/file/bulkrnaseqvolcanopng27 Jul 2024: Search site. Core Bioinformatics group. bulk_rnaseq_volcano.png. The truth is rarely pure and never simple. Oscar Wilde, The Importance of Being Earnest. core-bioinformatics-website-1000.png. Wellcome - MRC Cambridge Stem Cell Institute. Jeffrey -
BletchleyFeb2023_1.png | Core Bioinformatics group
https://www.corebioinf.stemcells.cam.ac.uk/file/bletchleyfeb20231png27 Jul 2024: Search site. Core Bioinformatics group. BletchleyFeb2023_1.png. The truth is rarely pure and never simple. Oscar Wilde, The Importance of Being Earnest. core-bioinformatics-website-1000.png. Wellcome - MRC Cambridge Stem Cell Institute. Jeffrey -
Andi Munteanu | Core Bioinformatics group
https://www.corebioinf.stemcells.cam.ac.uk/staff/andi-munteanu27 Jul 2024: This MSc balances taught modules and research; for the latter, over the last year, I focused on the topic of clustering stability on biological data (single cell high throughput expression data). -
Tools | Core Bioinformatics group
https://www.corebioinf.stemcells.cam.ac.uk/pipelines-tools/tools23 Feb 2024: Search site. Core Bioinformatics group. Tools. Tools. The truth is rarely pure and never simple. Oscar Wilde, The Importance of Being Earnest. core-bioinformatics-website-1000.png. Wellcome - MRC Cambridge Stem Cell Institute. Jeffrey Cheah -
BletchleyPark_House.jpg | Core Bioinformatics group
https://www.corebioinf.stemcells.cam.ac.uk/file/bletchleyparkhousejpg27 Jul 2024: Search site. Core Bioinformatics group. BletchleyPark_House.jpg. The truth is rarely pure and never simple. Oscar Wilde, The Importance of Being Earnest. core-bioinformatics-website-1000.png. Wellcome - MRC Cambridge Stem Cell Institute. Jeffrey -
Cristian Bulgaru | Core Bioinformatics group
https://www.corebioinf.stemcells.cam.ac.uk/staff/cristian-bulgaru27 Jul 2024: Search site. Core Bioinformatics group. Cristian Bulgaru. MSc Artificial Intelligence and Optimization (2022-). Data Science Starter Program (2022-2023). Currently enrolled in the Artificial Intelligence and Optimization MSc program at University A. -
Alex Calderwood | Core Bioinformatics group
https://www.corebioinf.stemcells.cam.ac.uk/staff/alex-calderwood27 Jul 2024: Before working at the CSCI I was a post-doc at the John Innes Centre, Norwich Research Park, UK, where I worked on comparative transcriptomics over plant development. -
Cameron Crawford | Core Bioinformatics group
https://www.corebioinf.stemcells.cam.ac.uk/staff/cameron-crawford27 Jul 2024: Search site. Core Bioinformatics group. Cameron Crawford. I started my Bachelor's degree in Computer Science at the University of Cambridge in 2021 and joined the Core Bioinformatics group as an intern at the end of my first year. Throughout my -
feamiR_dtree_voting.png | Core Bioinformatics group
https://www.corebioinf.stemcells.cam.ac.uk/file/feamirdtreevotingpng27 Jul 2024: Search site. Core Bioinformatics group. feamiR_dtree_voting.png. Alt Text:. Boxplot showing distribution, on DTs, over 100 subsamples of the full H. sapiens dataset. Title Text:. Boxplot showing distribution, on DTs, over 100 subsamples of the full H -
Data | Core Bioinformatics group
https://www.corebioinf.stemcells.cam.ac.uk/data27 Jul 2024: Search site. Core Bioinformatics group. Data. Core Bioinformatics group. Data. Data acquisition, traceability and curation. We operate a strict policy of experimental record-keeping with traceable identifiers for each experiment that are linked to -
ClustAssess is on biorxiv! | Core Bioinformatics group
https://www.corebioinf.stemcells.cam.ac.uk/news/clustassess-biorxiv27 Jul 2024: Search site. Core Bioinformatics group. ClustAssess is on biorxiv! Submitted by Dr Irina Mohorianu on Fri, 04/02/2022 - 06:24. A new preprint (describing ClustAssess) is on bioarxiv:. “ClustAssess: tools for assessing the robustness of single-cell -
FlorisJohanMariaRoos.jpg | Core Bioinformatics group
https://www.corebioinf.stemcells.cam.ac.uk/file/florisjohanmariaroosjpg27 Jul 2024: Search site. Core Bioinformatics group. FlorisJohanMariaRoos.jpg. The truth is rarely pure and never simple. Oscar Wilde, The Importance of Being Earnest. core-bioinformatics-website-1000.png. Wellcome - MRC Cambridge Stem Cell Institute. Jeffrey -
alternative-splicing.jpg | Core Bioinformatics group
https://www.corebioinf.stemcells.cam.ac.uk/file/alternative-splicingjpg27 Jul 2024: Search site. Core Bioinformatics group. alternative-splicing.jpg. The truth is rarely pure and never simple. Oscar Wilde, The Importance of Being Earnest. core-bioinformatics-website-1000.png. Wellcome - MRC Cambridge Stem Cell Institute. Jeffrey -
bulkAnalyseR is on biorxiv! | Core Bioinformatics group
https://www.corebioinf.stemcells.cam.ac.uk/news/bulkanalyser-biorxiv27 Jul 2024: Search site. Core Bioinformatics group. bulkAnalyseR is on biorxiv! Submitted by Dr Irina Mohorianu on Fri, 04/02/2022 - 06:20. A new preprint (describing bulkAnalyseR) is on bioarxiv:. “bulkAnalyseR: An accessible, interactive pipeline for -
i2.png | Core Bioinformatics group
https://www.corebioinf.stemcells.cam.ac.uk/file/i2png23 Feb 2024: Search site. Core Bioinformatics group. i2.png. The truth is rarely pure and never simple. Oscar Wilde, The Importance of Being Earnest. core-bioinformatics-website-1000.png. Wellcome - MRC Cambridge Stem Cell Institute. Jeffrey Cheah Biomedical -
i1.png | Core Bioinformatics group
https://www.corebioinf.stemcells.cam.ac.uk/file/i1png23 Feb 2024: Search site. Core Bioinformatics group. i1.png. The truth is rarely pure and never simple. Oscar Wilde, The Importance of Being Earnest. core-bioinformatics-website-1000.png. Wellcome - MRC Cambridge Stem Cell Institute. Jeffrey Cheah Biomedical -
Arash Shahsavari | Core Bioinformatics group
https://www.corebioinf.stemcells.cam.ac.uk/staff/arash-shahsavari27 Jul 2024: Search site. Core Bioinformatics group. Arash Shahsavari. MSc Complex Adaptive Systems (2019). In 2019 I finished my master’s studies at Chalmers University of Technology, in Gothenburg, Sweden, with a thesis on single-cell RNA-seq clustering and -
image_processing_panels.png | Core Bioinformatics group
https://www.corebioinf.stemcells.cam.ac.uk/file/imageprocessingpanelspng27 Jul 2024: Search site. Core Bioinformatics group. image_processing_panels.png. The truth is rarely pure and never simple. Oscar Wilde, The Importance of Being Earnest. core-bioinformatics-website-1000.png. Wellcome - MRC Cambridge Stem Cell Institute. Jeffrey -
Pipelines | Core Bioinformatics group
https://www.corebioinf.stemcells.cam.ac.uk/pipelines-tools/pipelines23 Feb 2024: Search site. Core Bioinformatics group. Pipelines. Pipelines. mRNA-Seq. mRNA-Seq alternative splicing. ChIP-Seq. scRNA-Seq. bisulfite-Seq. Nextflow. The truth is rarely pure and never simple. Oscar Wilde, The Importance of Being Earnest. -
Contact us | Core Bioinformatics group
https://www.corebioinf.stemcells.cam.ac.uk/contact-us23 Feb 2024: Search site. Core Bioinformatics group. Contact us. Core Bioinformatics group. Contact us. We are based here:. Wellcome - MRC Cambridge Stem Cell Institute. Jeffrey Cheah Biomedical Centre. Puddicombe Way. Cambridge, CB2 0AW. Irina Mohorianu, Head -
feamiR_feature_heatmap.png | Core Bioinformatics group
https://www.corebioinf.stemcells.cam.ac.uk/file/feamirfeatureheatmappng27 Jul 2024: Search site. Core Bioinformatics group. feamiR_feature_heatmap.png. Alt Text:. Heatmap showing the discriminative power of features across the 5 feature-selection methods on the full H. sapiens positive set. Title Text:. Heatmap showing the -
BletchleyFebruary2023_3.jpg | Core Bioinformatics group
https://www.corebioinf.stemcells.cam.ac.uk/file/bletchleyfebruary20233jpg27 Jul 2024: Search site. Core Bioinformatics group. BletchleyFebruary2023_3.jpg. The truth is rarely pure and never simple. Oscar Wilde, The Importance of Being Earnest. core-bioinformatics-website-1000.png. Wellcome - MRC Cambridge Stem Cell Institute. Jeffrey -
BletchleyFebruary2023_2.jpg | Core Bioinformatics group
https://www.corebioinf.stemcells.cam.ac.uk/file/bletchleyfebruary20232jpg27 Jul 2024: Search site. Core Bioinformatics group. BletchleyFebruary2023_2.jpg. The truth is rarely pure and never simple. Oscar Wilde, The Importance of Being Earnest. core-bioinformatics-website-1000.png. Wellcome - MRC Cambridge Stem Cell Institute. Jeffrey -
Join us | Core Bioinformatics group
https://www.corebioinf.stemcells.cam.ac.uk/join-us23 Feb 2024: Research Assistants, prospective PhD students and Research Associates are welcome. The truth is rarely pure and never simple. -
noisyR | Core Bioinformatics group
https://www.corebioinf.stemcells.cam.ac.uk/news/noisyr23 Feb 2024: Search site. Core Bioinformatics group. noisyR. Submitted by Dr Irina Mohorianu on Mon, 18/01/2021 - 07:56. NoisyR is now submitted to biorXiv. noisyR: Enhancing biological signal in sequencing datasets by characterising random technical noise. the -
cameroncrawford_photo.jpeg | Core Bioinformatics group
https://www.corebioinf.stemcells.cam.ac.uk/file/cameroncrawfordphotojpeg-027 Jul 2024: Search site. Core Bioinformatics group. cameroncrawford_photo.jpeg. The truth is rarely pure and never simple. Oscar Wilde, The Importance of Being Earnest. core-bioinformatics-website-1000.png. Wellcome - MRC Cambridge Stem Cell Institute. Jeffrey -
Irina Mohorianu | Core Bioinformatics group
https://www.corebioinf.stemcells.cam.ac.uk/staff/irina-mohorianu27 Jul 2024: Nucleic Acids Research. bulkAnalyseR: An accessible, interactive pipeline for analysing and sharing bulk multi-modal sequencing data. -
William (Billy) Dunn | Core Bioinformatics group
https://www.corebioinf.stemcells.cam.ac.uk/staff/william-billy-dunn27 Jul 2024: Search site. Core Bioinformatics group. William (Billy) Dunn. BSc (MedSci) (2013). MBChB (Hons) (2015). MSc Bioinformatics (2017). MRCP (2020). PhD in Stem Cell Biology (2022-present). I completed my intercalated BSc, medical degree and MSc at the -
Teaching material | Core Bioinformatics group
https://www.corebioinf.stemcells.cam.ac.uk/teaching-material27 Jul 2024: Search site. Core Bioinformatics group. Teaching material. Core Bioinformatics group. Teaching. All teaching materials from the Core Bioinformatics group can be found on our GitHub page. CSCI Teaching. Introduction to RNAseq. This repository -
Kendig (Kenny) Sham | Core Bioinformatics group
https://www.corebioinf.stemcells.cam.ac.uk/staff/kendig-kenny-sham27 Jul 2024: My aim is to expand my Machine Learning skills and apply classic and novel approaches on RNA-seq datasets (at bulk and single-cell level) while working as a Research Assistant -
g78067.png | Core Bioinformatics group
https://www.corebioinf.stemcells.cam.ac.uk/file/g78067png23 Feb 2024: Search site. Core Bioinformatics group. g78067.png. The truth is rarely pure and never simple. Oscar Wilde, The Importance of Being Earnest. core-bioinformatics-website-1000.png. Wellcome - MRC Cambridge Stem Cell Institute. Jeffrey Cheah Biomedical -
Toby Milne-Clark | Core Bioinformatics group
https://www.corebioinf.stemcells.cam.ac.uk/staff/toby-milne-clark27 Jul 2024: disciplines. Consequently, I studied for an MSc in Statistics and Data Science with the Université Grenoble Alpes during which I worked in multiple Research Assistant roles for various laboratories at the ... I am keen on applying machine learning -
Ilias Moutsopoulos | Core Bioinformatics group
https://www.corebioinf.stemcells.cam.ac.uk/staff/ilias-moutsopoulos27 Jul 2024: I am currently working with dr. Irina Mohorianu as a research assistant at the Cambridge Stem Cell Institute, developing pipelines for the analysis of diverse types of data. ... Nucleic Acids Research. Contact Details. im383 at cam.ac.uk. Available for -
BletchleyPark_BombeMachine.jpg | Core Bioinformatics group
https://www.corebioinf.stemcells.cam.ac.uk/file/bletchleyparkbombemachinejpg27 Jul 2024: Search site. Core Bioinformatics group. BletchleyPark_BombeMachine.jpg. The truth is rarely pure and never simple. Oscar Wilde, The Importance of Being Earnest. core-bioinformatics-website-1000.png. Wellcome - MRC Cambridge Stem Cell Institute. -
chipseq.png | Core Bioinformatics group
https://www.corebioinf.stemcells.cam.ac.uk/file/chipseqpng23 Feb 2024: Search site. Core Bioinformatics group. chipseq.png. The truth is rarely pure and never simple. Oscar Wilde, The Importance of Being Earnest. core-bioinformatics-website-1000.png. Wellcome - MRC Cambridge Stem Cell Institute. Jeffrey Cheah -
Photos | Core Bioinformatics group
https://www.corebioinf.stemcells.cam.ac.uk/photos23 Feb 2024: Search site. Core Bioinformatics group. Photos. Core Bioinformatics group. Photos. Christmas 2023 at King's College. Christmas at King's College December 2023; bottom row: Friedrich, Rafael, top row: Cameron, Irina, Miguel, Eleanor. Christmas at King -
nclusters-pac-text.png | Core Bioinformatics group
https://www.corebioinf.stemcells.cam.ac.uk/file/nclusters-pac-textpng-027 Jul 2024: Search site. Core Bioinformatics group. nclusters-pac-text.png. The truth is rarely pure and never simple. Oscar Wilde, The Importance of Being Earnest. core-bioinformatics-website-1000.png. Wellcome - MRC Cambridge Stem Cell Institute. Jeffrey -
workflow.png | Core Bioinformatics group
https://www.corebioinf.stemcells.cam.ac.uk/file/workflowpng23 Feb 2024: Search site. Core Bioinformatics group. workflow.png. Alt Text:. Workflow diagram of the noisyR pipeline. Title Text:. Workflow diagram of the noisyR pipeline. The truth is rarely pure and never simple. Oscar Wilde, The Importance of Being Earnest. -
feamiR_statistical_heatmap.png | Core Bioinformatics group
https://www.corebioinf.stemcells.cam.ac.uk/file/feamirstatisticalheatmappng27 Jul 2024: Search site. Core Bioinformatics group. feamiR_statistical_heatmap.png. Alt Text:. Heatmaps illustrating chi-squared and Fisher exact p-values when assessing differences in positional proportions of single nucleotides (left) and dinucleotides (right) -
bletchleypark_september2023_2.jpg | Core Bioinformatics group
https://www.corebioinf.stemcells.cam.ac.uk/file/bletchleyparkseptember20232jpg27 Jul 2024: Search site. Core Bioinformatics group. bletchleypark_september2023_2.jpg. The truth is rarely pure and never simple. Oscar Wilde, The Importance of Being Earnest. core-bioinformatics-website-1000.png. Wellcome - MRC Cambridge Stem Cell Institute. -
bletchleypark_september2023_1.jpg | Core Bioinformatics group
https://www.corebioinf.stemcells.cam.ac.uk/file/bletchleyparkseptember20231jpg27 Jul 2024: Search site. Core Bioinformatics group. bletchleypark_september2023_1.jpg. The truth is rarely pure and never simple. Oscar Wilde, The Importance of Being Earnest. core-bioinformatics-website-1000.png. Wellcome - MRC Cambridge Stem Cell Institute. -
Eleanor Williams | Core Bioinformatics group
https://www.corebioinf.stemcells.cam.ac.uk/staff/eleanor-williams27 Jul 2024: Presented as a poster at RECOMB 2022 (Conference on Research in Computational Molecular Biology) at University of California San Diego, USA. ... Nucleic Acids Research. feamiR: Feature selection based on Genetic Algorithms for predicting miRNA-mRNA -
bisulfite.png | Core Bioinformatics group
https://www.corebioinf.stemcells.cam.ac.uk/file/bisulfitepng23 Feb 2024: Search site. Core Bioinformatics group. bisulfite.png. The truth is rarely pure and never simple. Oscar Wilde, The Importance of Being Earnest. core-bioinformatics-website-1000.png. Wellcome - MRC Cambridge Stem Cell Institute. Jeffrey Cheah -
ClustAssess | Core Bioinformatics group
https://www.corebioinf.stemcells.cam.ac.uk/news/clustassess23 Feb 2024: Search site. Core Bioinformatics group. ClustAssess. Submitted by Dr Irina Mohorianu on Sat, 10/04/2021 - 08:41. A new R package, ClustAssess, developed in the group is available on CRAN. with further info on our github:. Well done, Arash! The truth -
imohorianu.jpg | Core Bioinformatics group
https://www.corebioinf.stemcells.cam.ac.uk/file/imohorianujpg23 Feb 2024: Search site. Core Bioinformatics group. imohorianu.jpg. The truth is rarely pure and never simple. Oscar Wilde, The Importance of Being Earnest. core-bioinformatics-website-1000.png. Wellcome - MRC Cambridge Stem Cell Institute. Jeffrey Cheah -
dorinmiron.jpg | Core Bioinformatics group
https://www.corebioinf.stemcells.cam.ac.uk/file/dorinmironjpg23 Feb 2024: Search site. Core Bioinformatics group. dorinmiron.jpg. The truth is rarely pure and never simple. Oscar Wilde, The Importance of Being Earnest. core-bioinformatics-website-1000.png. Wellcome - MRC Cambridge Stem Cell Institute. Jeffrey Cheah -
KendigSham.jpg | Core Bioinformatics group
https://www.corebioinf.stemcells.cam.ac.uk/file/kendigshamjpg23 Feb 2024: Search site. Core Bioinformatics group. KendigSham.jpg. The truth is rarely pure and never simple. Oscar Wilde, The Importance of Being Earnest. core-bioinformatics-website-1000.png. Wellcome - MRC Cambridge Stem Cell Institute. Jeffrey Cheah -
feamiR_ega.png | Core Bioinformatics group
https://www.corebioinf.stemcells.cam.ac.uk/file/feamiregapng23 Feb 2024: Search site. Core Bioinformatics group. feamiR_ega.png. Alt Text:. Summary of features selected by eGA on full H. sapiens positive and negative sets. Title Text:. Summary of features selected by eGA on full H. sapiens positive and negative sets. The -
Welcome Toby! | Core Bioinformatics group
https://www.corebioinf.stemcells.cam.ac.uk/news/welcome-toby23 Feb 2024: Search site. Core Bioinformatics group. Welcome Toby! Submitted by Dr Irina Mohorianu on Mon, 03/05/2021 - 06:29. We welcome a new member of the group - Toby Milne Clark! The truth is rarely pure and never simple. Oscar Wilde, The Importance of
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