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  2. > Home > Software > ProSMART ProSMART - Comparative ...

    https://www2.mrc-lmb.cam.ac.uk/groups/murshudov/content/prosmart/prosmart.html
    13 Dec 2018: Acta Cryst. D70, 2487-2499. Download ProSMART. ProSMART is distributed as part of theInstallation and usage instructions. ... Download HTML files to generate ProSMART colour legends.
  3. CootCryoEMPractical-v2.md

    https://www2.mrc-lmb.cam.ac.uk/personal/pemsley/coot/files/CootCryoEMPractical-v2.md.html
    15 Aug 2018: Put the scripting files in $HOME/.coot-preferences (make the directory if needed). ... Using a web browser, download the following. Using Coot:. Calculate -> Scripting -> Python.
  4. Coot Cryo-EM Tutorial 2: Fitting and Mutating | Coot Development Blog

    https://www2.mrc-lmb.cam.ac.uk/coot/blog/2020/10/20/Coot-Cryo-EM-main.html
    20 Oct 2020: 1: Setting Up. 1.1 Fetch the Files. Using a web browser, download the bundle for EMD-3908. ... Move that tar file here and extract it. Let’s download the sequence of a fragment of the structure:.
  5. Resources

    https://www2.mrc-lmb.cam.ac.uk/groups/lancaster/resources/
    / Resources. Resources. Protocol files for download. Cerebral-organoids-kit.docx. 52.6 KiB. 430 Downloads.
  6. Coot Cryo-EM Practical

    https://www2.mrc-lmb.cam.ac.uk/personal/pemsley/coot/web/tutorial/Coot-Cryo-EM.html
    8 Aug 2019: 1: Setting Up. 1.1 Fetch the Files. Using a web browser, download the bundle for EMD-3908. ... Move that tar file here and extract it. Let’s download the sequence of a fragment of the structure:.
  7. https://www2.mrc-lmb.cam.ac.uk/groups/lancaster/wp-json/wp/v2/pages/29

    https://www2.mrc-lmb.cam.ac.uk/groups/lancaster/wp-json/wp/v2/pages/29
    content":{"rendered":"pProtocol files for download/pn","protected":false},"excerpt":{"rendered":"pProtocol files for
  8. Contents:

    https://www2.mrc-lmb.cam.ac.uk/groups/murshudov/content/balbes/documentation_fs/manual_115.html
    31 Jan 2012: After you download one of gziped tar files, e.g. BALBES_1.1.1_DB_Oct_1_2010_Linux.tar.gz, move it under CCP4 package by, e.g. ... You need to do the following steps. After you download one of gziped tar files, e.g.
  9. Using Coot for model building into EM maps:A tutorial ...

    https://www2.mrc-lmb.cam.ac.uk/personal/pemsley/coot/files/EM-Tutorial-Coot-PE.pdf
    8 Sep 2015: http://www2.mrclmb.cam.ac.uk/Personal/pemsley/coot/files/BrownTutorial.zip. For reference, download the coordinates for FRH (4CI0.pdb). 2. Load the model into Coot. ... Note ‘Auto Open MTZ’ does not work for MTZ files from EM maps.
  10. The Coot User Manual

    https://www2.mrc-lmb.cam.ac.uk/personal/pemsley/coot/web/docs/coot.html
    1 Mar 2021: Atom Labeling:. • Atom Colouring:. • Bond Parameters:. • Download coordinates:. • ... Writing PDB files:. Modelling and Building. • Regularization and Real Space Refinement:. •
  11. file:///Users/flong/workplace/balbes_web/MRC-LMB/Webpage/content/balbe…

    https://www2.mrc-lmb.cam.ac.uk/groups/murshudov/content/balbes/documentation_fs/manual_115.pdf
    9 Feb 2012: 1. After you download one of gziped tar files, e.g. BALBES_1.1.1_DB_Oct_1_2010_Linux.tar.gz, move itunder CCP4 package by, e.g. ... 1. After you download one of gziped tar files, e.g. BALBES_1.1.1_DB_Oct_1_2010_Linux.tar.gz, move it tothe directory you
  12. Paul EmsleyMRC Laboratory of Molecular Biology, Cambridge, UKJune…

    https://www2.mrc-lmb.cam.ac.uk/personal/pemsley/coot/files/Ligands-July-2015-v2.pdf
    16 Jul 2015: Download all these minimal descriptions and run Acedrg. – 7360 cif files generated (93% coverage). ... Software to match wwPDB files to reference chiralities. A database of these chiralities.
  13. coot-user-manual.dvi

    https://www2.mrc-lmb.cam.ac.uk/personal/pemsley/coot/web/docs/coot-user-manual.pdf
    28 Sep 2012: 21. 4.6 Download coordinates. 214.7 Get Coordinates and Map from EDS. ... ins/.res and CIF files. • --data filename for mtz, phs or mmCIF data file. •

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