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About SUPERFAMILY
https://supfam.mrc-lmb.cam.ac.uk/aboutFor each genome you can:. Examine superfamily assignments, phylogenetic trees, domain organisation lists and networks. ... All annotation, models and the database dump are freely available for download to everyone. -
SUPERFAMILY database of structural and functional protein annotations …
https://supfam.mrc-lmb.cam.ac.uk/SUPERFAMILY/All annotation, models and the database dump are freely available for download to everyone. ... Submit your protein, or DNA, sequence for SCOP superfamily and family level classification. -
TreeVector - Integrated Phylogenetic Trees Using SVG
https://supfam.mrc-lmb.cam.ac.uk/TreeVector/about.htmlThe software is available using a form online or for local command line use, see download page for local use version. ... Download and Install. Source code for TreeVector is available here. -
Download SUPERFAMILY Models, Database Dump and Genome Assignments
https://supfam.mrc-lmb.cam.ac.uk/SUPERFAMILY/downloads.htmlModels. The hidden Markov models are available for download in HMMER3 (/models/hmmlib_1.75.gz) format in the models directory. ... Seed sequences of SUPERFAMILY models. The SCOP domains used as seed sequences to build the SUPERFAMILY models are available -
Description of the SUPERFAMILY Database and Web Site
https://supfam.mrc-lmb.cam.ac.uk/SUPERFAMILY/description.htmlAll annotation, models and the database dump are freely available for download to everyone. ... Downloads are instantly available upon application for a free license. -
dcGO - A comprehensive domain-centric ontology resource for…
https://supfam.mrc-lmb.cam.ac.uk/SUPERFAMILY/dcGO/How to access dcGO (Download). Both flat files and MySQL tables are available for download along with detailed documentation. ... In addition to SCOP domains, GO annotations to Pfam families are also provided (see PFAM Hierarchy and PFAM2GO Download).. -
SUPERFAMILY Recent news
https://supfam.mrc-lmb.cam.ac.uk/SUPERFAMILY/news.htmlThey will be available for download, from the ftp site, on Monday 4th May. ... A new HMM library based on SCOP 1.73 is now available for download from the ftp site.
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